 |
Job Description | P69856 | Confidence | 6.19% | Date | Thu Jan 5 12:12:14 GMT 2012 |
Rank | 69 | Aligned Residues | 37 |
% Identity | 5% | Template | c3ftoA_ |
PDB info |
PDB header:peptide binding protein | Chain: A: PDB Molecule:oligopeptide-binding protein oppa; |
PDBTitle: crystal structure of oppa in a open conformation
|
Resolution | 2.38 Å |
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | L | D | D | Q | W | T | V | R | P | G | M | L | T | H | F | . |
. |
S | S | N | G | T | R | Y | G | P | Y | V | K | L | S | W | D | A | T | K | D |
Query Conservation |   |
  |
|   |   |
|   |   |   |
|   |
|
|   |   |   |   |   | . | . |   |   |   |   |
|   |
|
|
|   |
|
|   |   |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |
|   |
|   |   |
|   |
|
|   |
|
|   |
|
|   |
|
|
|
|
Template Sequence |   |
F | F | T | D | S | G | F | K | F | I | K | G | G | A | A | D | V | A | L | D | K | E | S | K | T | A | T | I | T | L | R | K | D | L | K | W | S | D | G |
Template Known Secondary structure |   |
|  |  |
| T | T | S | B |  |  | S |
| S | S |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |
| T | T |
| B |
| T | T | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|