Job Description P69856 Confidence 4.41% Date Thu Jan 5 12:12:14 GMT 2012 Rank 91 Aligned Residues 203 % Identity 15% Template c2x4mD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:coagulase/fibrinolysin; PDBTitle: yersinia pestis plasminogen activator pla Resolution 2.55 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	T	L	D	V	R	G	G	Y	R	S	G	S	H	A	Y	E	T	R	L	K	V	S	E	G	W	Q	N	G	W	W	A	S	M	E	S	N	T	W	N	T	I	H	D	N	K	K	E	N	A	A	L	N	D	V	Q	V	E	V	N	Y	A	I	K	L	D	D	Q	W	T	V	R	P	G	M	L	T	H
Query Conservation
Alig confidence																			.																																																									.	.	.	.	.	.
Template Conservation																			.																																																									.	.	.	.	.	.
Template Sequence		N	V	A	I	L	K	G	D	I	S	W	D	P	Y	S	F	L	.	T	L	N	A	R	G	W	T	S	L	A	S	G	S	G	N	M	D	D	Y	A	W	M	N	E	N	Q	S	E	W	T	D	H	S	S	H	P	A	T	N	V	N	H	A	N	E	Y	D	L	N	V	K	G	W	L	L	.	.	.	.	.	.
Template Known Secondary structure															S	T	T		.											S	S													S	S		S	S		S						T																		S		.	.	.	.	.	.
Template Predicted Secondary structure																			.																																																									.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		F	S	S	N	G	T	R	Y	G	P	Y	V	K	L	S	W	D	A	T	K	D	L	N	F	G	I	R	Y	R	Y	D	W	K	A	Y	R	Q	Q	D	L	S	G	D	M	S	R	D	N	V	H	R	W	.	.	.	.	.	D	G	Y	V	T	Y	H	I	N	S	D	F	T	F	A	W	Q	T	T	L	Y	S	K
Query Conservation																																																						.	.	.	.	.
Alig confidence		.																																																				.	.	.	.	.										.											.	.	.
Template Conservation		.																																																																		.											.	.	.
Template Sequence		.	Q	D	E	N	Y	K	A	G	I	T	A	G	Y	Q	E	T	R	F	S	W	T	A	T	G	G	S	Y	S	Y	N	N	G	A	Y	T	G	N	F	P	K	G	V	R	V	I	G	Y	N	Q	R	F	S	M	P	Y	I	G	L	A	G	Q	Y	R	I	N	.	D	F	E	L	N	A	L	F	K	F	.	.	.
Template Known Secondary structure		.			S	S																				S						T	T	T	T							T	T																								T	.	T										.	.	.
Template Predicted Secondary structure		.																																																																		.											.	.	.
Template SS confidence
			122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.																	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																				.	.	.	.	.	.	.	220	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	D	Y	R	Y	A	N	H	K	K	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	E	N	A	F	V	L	Q	Y	H	M	T	P	D	I	T	P	Y	I	E	Y	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	R	Q	G	V	Y	N	G
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	S	D	W	V	R	A	H	D	N	D	E	H	Y	M	R	D	L	T	F	R	E	K	T	S	G	S	R	Y	Y	G	T	V	I	N	A	G	Y	Y	V	T	P	N	A	K	V	F	A	E	F	T	Y	S	K	Y	D	E	G	K	G	G	T	Q	T	I	D	K	N	S	G	D	S	V	S	I	G	G	D	A	A
Template Known Secondary structure		.													G	G	G	T																									T	T																								T	T	T
Template Predicted Secondary structure		.
Template SS confidence
			197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	N	L	S	E	N	S	Y	R	I	G	V	S	F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	S	N	K	N	Y	T	V	T	A	G	L	Q	Y	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions