Return to main results Retrieve Phyre Job Id

Job DescriptionP69856
Confidence95.55%DateThu Jan 5 12:12:14 GMT 2012
Rank18Aligned Residues120
% Identity12%Templatec2x27X_
PDB info PDB header:membrane proteinChain: X: PDB Molecule:outer membrane protein oprg; PDBTitle: crystal structure of the outer membrane protein oprg from2 pseudomonas aeruginosa
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60. ........70.........80...... ...90... ......100..
Predicted Secondary structure 


.......















..



...........
Query SS confidence 


















. . . . . . .
























. .






. .








. . . . . . . . .
Query Sequence  LKVSEGWQNGWWASMESNT. . . . . . . WNTIHDNKKENAALNDVQVEVNYAI. . KLDDQWT. . VRPGMLTHF. . . . . . . . .
Query Conservation 


 
   

 
   
   .......     
           
    
  ..
  
   ..
 

     .........
Alig confidence 


















.......
























..






..








.........
Template Conservation     

 
     

                              
               

 
 
 
            
Template Sequence  LTFTYMFADKWGVELVAATPFNHQVDVKGLLDGKLADIKQLPPTLLLQYYPMGGTNSAFQPYGGLGVNYTTFFDEDLASN
Template Known Secondary structure  SSSSS







TTTTS

S
Template Predicted Secondary structure 




















Template SS confidence 















































































   50.........60.........70.........80.........90.........100.........110.........120.........
 
   103......110.........120.........130.........140. ........150.........160..
Predicted Secondary structure  ..........














.........








Query SS confidence  . . . . . . . . . .






































. . . . . . . . .




















Query Sequence  . . . . . . . . . . SSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDL. . . . . . . . . SGDMSRDNVHRWDGYVTYHIN
Query Conservation  ..........    
 


 

  
 

       




         .........          
 
    
   
Alig confidence  ..........






































.........




















Template Conservation                 
   
 
  
 


   
  

 
                                

  


 
Template Sequence  RKAQGFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIDTKASINGPSALGVNKTKVDVDVDPWVYMIGFGYKFH
Template Known Secondary structure  TT


SSSS



TTTT
S


Template Predicted Secondary structure 





























Template SS confidence 














































































   133......140.........150.........160.........170.........180.........190.........200.........210.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions