Job Description P69856 Confidence 39.94% Date Thu Jan 5 12:12:14 GMT 2012 Rank 47 Aligned Residues 157 % Identity 13% Template c2qtkB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:probable porin; PDBTitle: crystal structure of the outer membrane protein opdk from2 pseudomonas aeruginosa Resolution 2.80 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		G	Y	R	S	G	S	H	A	Y	E	T	R	L	K	V	S	E	G	W	Q	N	G	W	W	A	S	M	E	S	N	T	W	N	T	I	H	D	N	K	K	E	N	A	A	L	N	D	V	Q	V	E	V	N	Y	A	I	K	L	D	D	Q	W	T	V	R	P	G	M	L	T	H	F	S	S	N	G	T	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																						.																																							.																		.	.	.
Template Conservation																						.																																							.
Template Sequence		Q	L	E	D	V	Y	R	Q	S	Y	A	N	L	L	H	K	Q	R	V	G	.	D	W	T	L	G	A	N	L	G	L	F	V	D	R	D	D	G	A	A	R	A	G	E	I	D	S	H	T	V	Y	G	L	F	S	A	G	I	G	.	L	H	T	F	Y	L	G	L	Q	K	V	G	G	D	S	G	W	Q	S	V
Template Known Secondary structure				T	T	T															T	.	T																T	T		T	T																	T	.	T													S	S					B
Template Predicted Secondary structure																						.																																							.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
																							108	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	G	P	Y	V	K	L	S	W	D	A	T	.	.	.	.	K	D	L	N	F	G	I	R	Y	R	Y	D	W	K	A	Y	R	Q	Q	D	L	S	G	D	M	S	R	D	N	V	H	R	W	D	G	Y	V	T	Y	H	I	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.																		.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		Y	G	S	S	G	R	S	M	G	N	D	M	F	N	G	N	F	T	N	A	D	E	R	S	W	Q	V	R	Y	D	Y	D	F	V	G	L	G	W	P	G	L	I	G	M	V	R	Y	G	H	G	S	N	A	T	T	.	.	.	.	.	K	A	G	S	G	G	K	E	W	E	R	D	V	E	L	G	Y	T	V	Q
Template Known Secondary structure		T	T			G	G	G	S	T	T		B	T	T	B				S	B	T												G	G	G	G	T		T	T														B		.	.	.	.	.	S	S		S
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.						.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
						163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	S	D	F	T	F	A	W	Q	T	T	L	Y	S	K	Q	N	D	Y	R	Y	A	N	H	K	K	W	A	T	E	N	A	F	V	L	Q	Y	H	M	T
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.														.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		S	G	P	L	A	R	L	N	V	R	L	N	H	A	S	N	R	.	.	.	.	.	.	.	R	S	F	N	S	D	F	D	Q	T	R	L	V	V	S	Y	P	L	S
Template Known Secondary structure		S	S	S	S	T	T												.	.	.	.	.	.	.		S	S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370								.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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