Return to main results Retrieve Phyre Job Id

Job DescriptionP69856
Confidence6.38%DateThu Jan 5 12:12:14 GMT 2012
Rank66Aligned Residues159
% Identity9%Templatec1xkhC_
PDB info PDB header:membrane proteinChain: C: PDB Molecule:ferripyoverdine receptor; PDBTitle: pyoverdine outer membrane receptor fpva from pseudomonas aeruginosa2 pao1 bound to pyoverdine
Resolution3.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100....... ..110.........120.........130..... ....140.......
Predicted Secondary structure 








.........



...











Query SS confidence 



























. . . . . . . . .



























. . .











Query Sequence  VEVNYAIKLDDQWTVRPGMLTHFSSNGT. . . . . . . . . RYGPYVKLSWDATKDLNFGIRYRYDWKA. . . YRQQDLSGDMSR
Query Conservation      
  
  
   
 

         
......... 


 

  
 

       




   ...            
Alig confidence 



























.........



























...











Template Conservation                                                                            
  
 
Template Sequence  SYXTARFNVTDDLNLFLGGRVVDYRVTGLNPTIRESGRFIPYVGAVYDLNDTYSVYASYTDIFXPQDSWYRDSSNKLLEP
Template Known Secondary structure  SSSS


SSSS



SSS




TT


SSS




Template Predicted Secondary structure 















































Template SS confidence 















































































   531........540.........550.........560.........570.........580.........590.........600.........610
 
   148.150.........160.........170.........180..... ....190.........200.........
Predicted Secondary structure 











..................





Query SS confidence 





































. . . . . . . . . . . . . . . . . .























Query Sequence  DNVHRWDGYVTYHINSDFTFAWQTTLYSKQNDYRYANH. . . . . . . . . . . . . . . . . . KKWATENAFVLQYHMTPDITPYIE
Query Conservation      
 
    
         
              
 ..................
    
  
   

    
 



Alig confidence 





































..................























Template Conservation 
     
 
                
       
                   
       
 
                
Template Sequence  DEGQNYEIGIKGEYLDGRLNTSLAYFEIHEENRAEEDALYNSKPTNPAITYAYKGIKAKTKGYEAEISGELAPGWQVQAG
Template Known Secondary structure 
TTTT
SSTTS



TT
S

SSSS
Template Predicted Secondary structure 



















Template SS confidence 















































































   611........620.........630.........640.........650.........660.........670.........680.........690
 
   210.........220... ......230........
Predicted Secondary structure 






..




Query SS confidence 













. .














Query Sequence  YDYLDRQGVYNGRD. . NLSENSYRIGVSFKL
Query Conservation     

         ..   
 
 


  
 
Alig confidence 













..














Template Conservation   
                
         
  
Template Sequence  YTHKIIRDDSGKKVSTWEPQDQLSLYTSYKF
Template Known Secondary structure  TT

B

TTS
S
Template Predicted Secondary structure 











Template SS confidence 






























   691........700.........710.........720.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions