Job Description P0AG76 Confidence 100.00% Date Thu Jan 5 11:28:20 GMT 2012 Rank 1 Aligned Residues 361 % Identity 21% Template c3qg5D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:mre11; PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair Resolution 3.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		M	R	I	L	H	T	S	D	W	H	L	G	Q	N	F	Y	S	K	.	.	.	.	S	R	E	A	E	H	Q	A	F	L	D	W	L	L	E	T	A	Q	T	H	Q	V	D	A	I	I	V	A	G	D	V	F	D	T	G	S	P	P	S	Y	A	R	T	L	Y	N	R	F	V	V	N	L	Q	Q	T	G	C	H
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.
Template Conservation
Template Sequence		X	K	I	L	H	T	S	D	W	H	L	G	V	T	S	W	T	S	S	R	P	V	D	R	R	E	E	L	K	K	A	L	D	K	V	V	E	E	A	E	K	R	E	V	D	L	I	L	L	T	G	D	L	L	H	S	R	N	N	P	S	V	V	A	L	H	D	L	L	D	Y	L	K	R	X	X	R	T	A	P
Template Known Secondary structure												B	T					T	T	T	S				T																		T	T		S								S	B	S		S	S																			T	T	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	V	L	A	G	N	H	D	S	V	A	T	L	N	E	S	R	D	I	M	A	F	L	N	T	T	V	V	A	S	A	G	H	A	P	Q	I	L	P	R	R	D	G	T	P	G	A	V	L	C	P	I	P	F	L	R	P	R	D	I	I	T	S	Q	A	G	L	N	G	I	E	K	Q	Q	H	L	L	A	A
Query Conservation
Alig confidence																																											.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	V	L	P	G	N	H	D	W	K	G	L	K	L	F	G	N	F	V	T	S	I	S	S	D	I	T	F	V	X	S	F	E	P	V	D	V	E	A	K	.	.	R	G	Q	K	V	R	I	L	P	F	P	Y	P	D	E	S	E	A	L	R	.	.	.	.	.	.	.	.	.	.	.	.	K	N	E	G	D
Template Known Secondary structure								S			S	T	T													S	S						S	S	S							T	.	.	T														S						.	.	.	.	.	.	.	.	.	.	.	.				T
Template Predicted Secondary structure																																											.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.													.	.	150	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	D	Y	Y	Q	Q	H	Y	A	D	A	C	K	L	R	G	D	Q	P	L	P	I	I	A	T	G	H	L	T	T	V	G	A	S	K	S	D	A	V	R	D	I	Y	I	G	T	L	D	A	F	P	A	Q	N	F	P	P	A	D	Y	I	A	L	G	H	I	H	R	A	Q	I	I	G	G	M	E	H	V	R
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.
Template Sequence		F	R	F	F	L	E	S	R	L	N	K	L	Y	E	E	A	L	K	K	E	D	F	A	I	F	X	G	H	F	T	V	E	G	L	A	G	Y	R	.	.	.	.	.	.	.	.	E	I	I	I	N	R	A	L	I	P	S	V	V	D	Y	A	A	L	G	H	I	H	S	F	R	E	I	Q	K	Q	P	L	T	I
Template Known Secondary structure																			T		S	S								S			T	T	S					.	.	.	.	.	.	.	.						G	G	G	S		S	S		S						S		S	S							T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190									.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	G	S	P	I	P	L	S	F	D	E	C	G	K	S	K	Y	V	H	L	V	T	F	S	N	G	K	L	E	S	V	E	N	L	N	V	P	V	T	Q	P	M	A	V	L	K	G	D	L	A	S	I	T	A	Q	L	E	Q	W	R	D	V	S	Q	E	P	P	V	W	L	D	I	E	I	T	T	D	E	Y
Query Conservation
Alig confidence																																																		.	.
Template Conservation																																																		.	.
Template Sequence		Y	P	G	S	L	I	R	I	D	F	G	E	E	A	D	E	K	G	A	V	F	V	E	L	K	R	G	E	P	P	R	Y	E	R	I	D	A	S	P	L	P	L	K	T	L	Y	Y	K	.	.	K	I	D	T	S	A	L	K	S	I	R	D	F	C	R	N	F	P	G	Y	V	R	V	V	Y	E	E	D	S	G
Template Known Secondary structure						S	S			S	G	G	G	T	T												S	S	S																				S	.	.	S														T	T		S	S							S	S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	D	I	Q	R	K	I	Q	A	L	T	E	S	L	P	V	E	V	L	L	V	R	R	S	R	E	Q	R	E	R	V	L	A	S	Q	Q	R	E	T	L	S	E	L	S	V	E	E	V	F	N	R	R	L	A	L	E	E	L	D	E	S	Q	Q	Q	R	L	Q	H	L	F	T	T	T	L	H	T	L	A	G
Query Conservation
Alig confidence				.	.	.	.	.	.														.	.	.	.																																					.	.	.
Template Conservation				.	.	.	.	.	.														.	.	.	.																																					.	.	.
Template Sequence		I	L	.	.	.	.	.	.	P	D	L	X	G	E	I	D	N	L	V	K	I	.	.	.	.	E	R	K	S	R	R	E	I	E	E	V	L	R	E	E	L	D	K	L	D	Y	F	E	L	F	K	E	Y	L	K	K	R	E	E	N	H	.	.	.	E	K	L	L	K	I	L	D	E	L	L	D	E	V	K	K
Template Known Secondary structure		S		.	.	.	.	.	.								T	T					.	.	.	.												T																				S	S	S		S	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.														.	.	.	.																																					.	.	.
Template SS confidence
		309	310							.	.	.	.	.	.	.	.	.	320	.	.	.					.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.				360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		397	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		383	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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