Job Description P0AG76 Confidence 27.12% Date Thu Jan 5 11:28:20 GMT 2012 Rank 206 Aligned Residues 70 % Identity 13% Template c3kbqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein ta0487; PDBTitle: the crystal structure of the protein cina with unknown function from2 thermoplasma acidophilum Resolution 2.00 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.												.	.	.	70	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Query Sequence		L	G	Q	N	F	Y	S	K	S	R	E	A	E	H	Q	A	F	L	D	W	L	L	E	T	A	Q	T	H	Q	V	D	A	I	I	V	A	G	D	V	F	D	T	G	S	P	P	S	Y	A	R	T	L	Y	N	R	F	.	.	.	.	.	.	.	.	.	.	.	V	V	N	L	Q	.	.	.	.	.	.	.	.
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Alig confidence																														.											.	.																.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Template Conservation																														.											.	.
Template Sequence		H	G	Y	Q	V	R	R	G	F	V	V	M	D	D	L	D	E	I	G	W	A	F	R	V	A	L	E	V	.	S	D	L	V	V	S	S	G	G	L	.	.	G	P	T	F	D	D	M	T	V	E	G	F	A	K	C	I	G	Q	D	L	R	I	D	E	D	A	L	A	M	I	K	K	K	Y	G	L	T	P	Q
Template Known Secondary structure		T	T											S																.		S						S			.	.	S	S	S	T	T												T
Template Predicted Secondary structure																														.											.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
																													72	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	G	C	H	L	V	V	L	A	G	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	K	M	A	K	I	P	P	S	C	R	P	I	E	N	P	V	G	T	A	P	G	L	I	C	A	V	G	G	K	K	V	I	I	L	P	G	V
Template Known Secondary structure				G	G	G				T	T							S	S	S	S	S								T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions