Job Description P0AG76 Confidence 97.21% Date Thu Jan 5 11:28:20 GMT 2012 Rank 60 Aligned Residues 77 % Identity 14% Template c3floG_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna polymerase alpha subunit b; PDBTitle: crystal structure of the carboxyl-terminal domain of yeast2 dna polymerase alpha in complex with its b subunit Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																			.	.	.	.	.	60
Predicted Secondary structure																																								.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query SS confidence																																								.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query Sequence		M	R	I	L	H	T	S	D	W	H	L	G	Q	N	F	Y	S	K	S	R	E	A	E	H	Q	A	F	L	D	W	L	L	E	T	A	Q	T	H	.	Q	V	D	A	I	I	V	A	G	D	V	F	D	T	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	S	Y	A	R	.
Query Conservation																																								.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Alig confidence																			.	.	.	.	.	.	.															.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		L	K	V	I	V	T	C	G	P	Y	F	A	N	D	N	F	S	.	.	.	.	.	.	.	L	E	L	L	Q	E	F	I	D	S	I	N	N	E	V	K	P	H	V	L	I	M	F	G	P	F	I	D	I	T	H	P	L	I	A	S	G	K	L	P	N	F	P	Q	F	K	T	Q	P	K	T	L	D	E	L	F
Template Known Secondary structure									S			S		T	T				.	.	.	.	.	.	.														T	T			S						S		S	S	B	T	T	S						T						T	T		S	S			S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.								410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
			61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	T	L	Y	N	R	F	V	V	N	L	Q	Q	T	G	C	H	L	V	V	L	A	G	N	H	D
Query Conservation		.
Alig confidence		.														.
Template Conservation																.
Template Sequence		L	K	L	F	T	P	I	L	K	T	I	S	P	H	.	I	Q	T	V	L	I	P	S	T	K	D
Template Known Secondary structure					T					T	T	S		T	T	.	S								T	T	B
Template Predicted Secondary structure																.
Template SS confidence
		466	.	.	.	470	.	.	.	.	.	.	.	.	.		480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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