Job Description P0AG76 Confidence 23.06% Date Thu Jan 5 11:28:20 GMT 2012 Rank 239 Aligned Residues 58 % Identity 14% Template c3ew8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:histone deacetylase 8; PDBTitle: crystal structure analysis of human hdac8 d101l variant Resolution 1.80 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.								.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																			.									.	.	.	.	.	.	.
Query SS confidence																			.									.	.	.	.	.	.	.
Query Sequence		A	E	H	Q	A	F	L	D	W	L	L	E	T	A	Q	T	H	.	Q	V	D	A	I	I	V	A	.	.	.	.	.	.	.	G	D	V	F	D	T	G	S	P	P	S	Y	A	R	T	L	Y	N	R	F	V	V	N	L	Q	Q	T	G	C	H	L	V	V	L	A	G
Query Conservation																			.									.	.	.	.	.	.	.
Alig confidence																			.									.	.	.	.	.	.	.																									.	.	.
Template Conservation																																																											.	.	.
Template Sequence		E	K	Y	Y	Q	I	C	E	S	V	L	K	E	V	Y	Q	A	F	N	P	K	A	V	V	L	Q	L	G	A	D	T	I	A	G	D	P	M	C	S	F	N	M	T	P	V	G	I	G	K	C	L	K	Y	I	L	Q	W	.	.	.	Q	L	A	T	L	I	L	G	G
Template Known Secondary structure																						S								S	T	T	B	T	T		T	T					B														T	T	.	.	.
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.				.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions