Job Description P0AG76 Confidence 99.44% Date Thu Jan 5 11:28:20 GMT 2012 Rank 32 Aligned Residues 154 % Identity 22% Template c2kknA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of themotoga maritima protein tm1076:2 northeast structural genomics consortium target vt57 Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		M	R	I	L	H	T	S	D	W	H	L	G	Q	N	F	Y	S	K	S	R	E	A	E	H	Q	A	F	L	D	W	L	L	E	T	A	Q	T	.	H	Q	V	D	A	I	I	V	A	G	D	V	F	D	T	G	S	P	P	S	Y	A	R	T	L	Y	N	R	F	V	V	N	L	Q	Q	T	G	C	H	L	V	V
Query Conservation																																							.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.													.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	F	L	L	I	S	D	S	H	V	P	V	.	.	.	.	.	.	.	.	.	.	.	.	R	M	A	S	L	P	D	E	I	L	N	S	L	K	E	Y	D	G	V	I	G	L	G	D	Y	V	D	.	.	.	.	.	.	.	.	.	.	.	.	L	D	T	V	I	L	L	E	K	F	S	K	E	F	Y	G
Template Known Secondary structure												B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	T	T										G	G	G	G		S					S	S		B	S		.	.	.	.	.	.	.	.	.	.	.	.											T	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.													.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.													.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	N	H	D	S	V	A	T	L	N	E	S	R	D	I	M	A	F	L	N	T	T	V	V	A	S	A	G	H	A	P	Q	I	L	P	R	R	D	G	T	P	G	A	V	L	C	P	I	P	F	L	R	P	R	D	I	I	T	S	Q	A	G	L	N	G	I	E	K	Q	Q	H	L	L	A	A	I	T	D
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	H	G	N	M	D	Y	P	D	V	K	E	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	S	K	V	L	L	V	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	S	S		G	G	G	G	G	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.																			.	.	.	.	.	.	.	.	80	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		Y	Y	Q	Q	H	Y	A	D	A	C	K	L	R	G	D	Q	P	L	P	I	I	A	T	G	H	L	T	T	V	G	A	S	K	S	D	A	V	R	D	I	Y	I	G	T	L	D	A	F	P	A	Q	N	F	P	P	A	D	Y	I	A	L	G	H	I	H	R	A	Q	I	I	G	.	G	M	E	H	V	R	Y	C
Query Conservation																																																																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	I	G	M	C	H	G	W	.	.	.	.	.	.	.	.	.	.	.	G	A	P	W	D	L	K	D	R	L	L	K	V	F	N	E	K	P	Q	V	I	L	F	G	H	T	H	E	P	E	D	T	V	K	A	G	V	R	F	L	N	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S		.	.	.	.	.	.	.	.	.	.	.														S	S	S			S						S		S	S							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				82	.	.	.	.	.	.	.	90												.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	P	I	P	L	S	F	D	E	C	G	K	S	K	Y	V	H	L	V	T	F	S	N	G	K	L	E	S	V	E	N	L	N	V
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.													.
Template Conservation							.	.	.	.	.	.	.	.	.													.
Template Sequence		G	S	L	A	E	.	.	.	.	.	.	.	.	.	G	S	Y	A	V	L	E	L	D	G	G	E	.	V	R	F	E	L	K	T	L
Template Known Secondary structure				T	T	T	.	.	.	.	.	.	.	.	.	T									T	T		.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.													.
Template SS confidence
		133	.	.	.	.										.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions