Job Description P43340 Confidence 99.74% Date Thu Jan 5 12:02:20 GMT 2012 Rank 34 Aligned Residues 145 % Identity 13% Template d1ycga1 SCOP info Flavodoxin-like Flavoproteins Flavodoxin-related Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	I	Y	L	V	W	A	H	P	R	H	D	S	L	T	A	H	I	A	D	A	I	H	Q	R	A	M	E	R	K	I	Q	V	T	E	L	D	L	Y	R	R	N	F	N	P	V	M	T	P	E	D	E	P	D	W	K	N	M	D	K	R	Y	S	P	E	V	H	Q	L	Y	S	E	L	L	E	H	D	T	L
Query Conservation
Alig confidence											.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	A	V	I	A	Y	D	T	.	.	M	W	L	S	T	E	K	M	A	H	A	L	M	D	G	L	V	A	G	G	C	E	V	K	L	F	K	L	S	V	S	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	V	I	K	E	I	L	D	A	R	A	V
Template Known Secondary structure		S									.	.	S	S	S																T	T								G	G	G	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S
Template Predicted Secondary structure											.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.																								.	.	.	.	.	300	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	V	F	P	L	W	W	Y	S	F	P	A	M	L	K	G	Y	I	D	R	V	W	N	N	G	L	A	Y	G	D	G	H	K	L	P	F	N	K	V	R	W	V	A	L	V	G	G	D	K	E	S	F	V	Q	M	G	W	E	K	N	I	S	D	Y	L	K	N	M	C	S	Y	L	G	I	E	D	A	D	V
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	G	S	P	T	I	N	N	D	I	L	P	V	V	S	P	L	L	D	D	L	.	.	.	.	.	.	.	.	V	G	L	R	P	K	N	K	V	G	L	A	F	G	A	Y	G	W	G	G	G	A	Q	.	.	.	.	.	.	.	.	.	.	K	I	L	E	E	R	L	K	A	A	K	I	E	L	I	A	E
Template Known Secondary structure								B	T	T	B			G	G	G								.	.	.	.	.	.	.	.						S	S										S	S	S					.	.	.	.	.	.	.	.	.	.										T	T				S		S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.									330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.											.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
				164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	T	F	L	C	N	T	V	V	F	D	G	E	E	L	H	A	S	Y	Y	Q	S	L	L	S	Q	V	R	D
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		P	G	P	T	V	Q	W	V	P	R	G	E	D	L	Q	R	C	Y	E	L	G	R	K	I	A	A	R	I	A	D
Template Known Secondary structure		S						S	S
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions