Return to main results Retrieve Phyre Job Id

Job DescriptionP43340
Confidence100.00%DateThu Jan 5 12:02:20 GMT 2012
Rank11Aligned Residues176
% Identity15%Templated1sqsa_
SCOP infoFlavodoxin-like Flavoproteins Hypothetical protein SP1951
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.... .....40.........50.. .......60.........70.........80.
Predicted Secondary structure 









.











.












Query SS confidence 






























.

















.




























Query Sequence  ERIYLVWAHPRHDSLTAHIADAIHQRAMERK. IQVTELDLYRRNFNPVMT. PEDEPDWKNMDKRYSPEVHQLYSELLEHD
Query Conservation   




 



  
 
  
       
   
. 

    
          .                        
  

Alig confidence 






























.

















.




























Template Conservation   


 
 

 
  
 
  
       
      
     
    
  
                  

   
   
  

Template Sequence  NKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLESD
Template Known Secondary structure 




TT
S


TTT











SSTTTST
S
Template Predicted Secondary structure 





































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  TLVVVFPLWWYSFPAMLKGYIDRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIEDA
Query Conservation   


  
 
    

 

  

 
            
  
        
                  
       
    
Alig confidence 



























....




















........


















Template Conservation   


 



   


 

 




    ....
   
 

    
 
  
 
 ........  
   
   
   
  

Template Sequence  IIIISSPVYLQNVSVDTKNFIERIGGWS. . . . HLFRLAGKFVVTLDVAESNGS. . . . . . . . DNVSEYLRDIFSYXGGQIL
Template Known Secondary structure 
SSS

TGGGT....TTTTTTT
SS

S........

TT
Template Predicted Secondary structure 








....










........

Template SS confidence 















































































   82.......90.........100......... 110.........120.........130 .........140.........
 
   162.......170.........180.........190.
Predicted Secondary structure 






Query SS confidence 





























Query Sequence  DVTFLCNTVVFDGEELHASYYQSLLSQVRD
Query Conservation                                
Alig confidence 





























Template Conservation                                
Template Sequence  HQVSITNSLKDIAEAQLXEATYKIEDVLEG
Template Known Secondary structure  GGGGGGTT
Template Predicted Secondary structure 





Template SS confidence 





























   150.........160.........170.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions