Job Description P43340 Confidence 99.95% Date Thu Jan 5 12:02:20 GMT 2012 Rank 25 Aligned Residues 150 % Identity 15% Template d1rlia_ SCOP info Flavodoxin-like Flavoproteins Hypothetical protein YwqN Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	Y	L	V	W	A	H	P	R	H	D	S	L	T	A	H	I	A	D	A	I	H	Q	R	A	M	E	R	K	I	Q	V	T	E	L	D	L	Y	R	R	N	F	N	P	V	M	T	P	E	D	E	P	D	W	K	N	M	D	K	R	Y	S	P	E	V	H	Q	L	Y	S	E	L	L	E	H	D	T	L	V
Query Conservation
Alig confidence																										.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	A	V	I	N	G	G	T	R	S	G	G	N	T	D	V	L	A	E	K	A	V	Q	.	.	.	.	.	G	F	D	A	E	H	I	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	D	S	I	I	E	R	I	L	Q	C	H	I	L	I
Template Known Secondary structure								S	S		S	S													T	.	.	.	.	.	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T		S
Template Predicted Secondary structure																										.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.																											.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		V	V	F	P	L	W	W	Y	S	F	P	A	M	L	K	G	Y	I	D	R	V	W	N	N	G	L	A	Y	.	.	.	G	D	G	H	K	L	P	F	N	K	V	R	W	V	A	L	V	G	G	D	K	E	S	F	V	Q	M	G	W	E	K	N	I	S	D	Y	L	K	N	M	C	S	Y	L	G	I	E	D	A
Query Conservation																														.	.	.
Alig confidence																														.	.	.																										.	.	.	.	.
Template Conservation																																																										.	.	.	.	.
Template Sequence		F	A	T	P	I	Y	W	F	G	M	S	G	T	L	K	L	F	I	D	R	W	S	Q	T	L	R	D	P	R	F	P	D	F	K	Q	Q	M	S	V	K	Q	A	Y	V	I	A	V	G	G	D	N	P	K	I	K	G	.	.	.	.	.	L	P	L	I	Q	Q	F	E	H	I	F	H	F	M	G	M	S	F	K
Template Known Secondary structure							B	T	T	B											T					T	T		T	T	S	T	T							T	S									S	S						T	.	.	.	.	.															T
Template Predicted Secondary structure																																																										.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	T	F	L	C	N	T	V	V	F	D	G	E	E	L	H	A	S	Y	Y	Q	S	L	L	S	Q	V	R	D	M	V	D	A
Query Conservation
Alig confidence																		.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		G	Y	V	L	G	E	G	N	R	P	G	D	I	L	R	D	.	.	.	.	.	H	Q	A	L	S	A	A	S	R	L	L	K	R
Template Known Secondary structure									S	S	T	T	G	G	G	G		.	.	.	.	.										T	T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions