Return to main results Retrieve Phyre Job Id

Job DescriptionP43340
Confidence80.54%DateThu Jan 5 12:02:20 GMT 2012
Rank88Aligned Residues54
% Identity13%Templated1iiba_
SCOP infoPhosphotyrosine protein phosphatases I-like PTS system IIB component-like PTS system, Lactose/Cellobiose specific IIB subunit
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  ERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYRRNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTL
Query Conservation   




 



  
 
  
       
   
 

    
                                  
  

 
Alig confidence 








...






























..........................










Template Conservation 




 
  ...
 


 
  

   
        
 
     ..........................        


Template Sequence  KHIYLFSSA. . . GMSTSLLVSKMRAQAEKYEVPVIIEAFPETL. . . . . . . . . . . . . . . . . . . . . . . . . . AGEKGQNADVV
Template Known Secondary structure  S
...TT

GGG..........................TT
S
Template Predicted Secondary structure 


...






..........................



Template SS confidence 















































































   4.....10.. .......20.........30.........40... ......50....
 
   84..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  VVV
Query Conservation 

 
Alig confidence 


Template Conservation 

 
Template Sequence  LLG
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   55..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions