Return to main results Retrieve Phyre Job Id

Job DescriptionP43340
Confidence22.82%DateThu Jan 5 12:02:20 GMT 2012
Rank276Aligned Residues42
% Identity10%Templatec3r23B_
PDB info PDB header:ligaseChain: B: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: crystal structure of d-alanine--d-alanine ligase from bacillus2 anthracis
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10...... ...20.........30.........40....
Predicted Secondary structure 







.






Query SS confidence 













.



























Query Sequence  SERIYLVWAHPRHD. SLTAHIADAIHQRAMERKIQVTELDLYR
Query Conservation    




 



  .
 
  
       
   
 

    
  
Alig confidence 













.



























Template Conservation    

 

 

 
 
   

 
       
   
  
  

   
Template Sequence  AXRIGVIXGGVSSEKQVSIXTGNEXIANLDKNKYEIVPITLNE
Template Known Secondary structure 


SS
TTT
SS
Template Predicted Secondary structure 













Template SS confidence 










































   0.........10.........20.........30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions