Job Description P43340 Confidence 21.81% Date Thu Jan 5 12:02:20 GMT 2012 Rank 288 Aligned Residues 67 % Identity 9% Template c3gx1A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin1832 protein; PDBTitle: crystal structure of a domain of lin1832 from listeria innocua Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		Q	S	E	R	I	Y	L	V	W	A	H	P	R	H	D	.	S	L	T	A	H	I	A	D	A	I	H	Q	R	A	M	E	R	K	I	Q	V	T	E	L	D	L	Y	R	R	N	F	N	P	V	M	T	P	E	D	E	P	D	W	K	N	M	D	K	R	Y	S	P	E	V	H	Q	L	Y	S	E	L	L	E	H
Query Conservation																	.
Alig confidence													.	.			.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	A	Q	V	E	V	I	V	X	X	.	.	H	G	R	S	T	A	T	S	X	V	E	T	V	Q	E	L	L	S	I	E	S	G	I	A	L	D	X	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	E	V	K	A	X	Y	E	K	L	K	Q	T	V	V	K	L	N	P	V
Template Known Secondary structure				S	S								.	.		S	S	S														T											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S															T	S			T
Template Predicted Secondary structure													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.			550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.																		.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	L	V	V	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	V	L	I	L	S
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		600	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions