Job Description P43340 Confidence 61.61% Date Thu Jan 5 12:02:20 GMT 2012 Rank 123 Aligned Residues 71 % Identity 17% Template c3g79A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ndp-n-acetyl-d-galactosaminuronic acid dehydrogenase; PDBTitle: crystal structure of ndp-n-acetyl-d-galactosaminuronic acid2 dehydrogenase from methanosarcina mazei go1 Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		M	Q	S	E	R	I	Y	L	V	W	A	H	.	.	P	R	H	D	S	L	T	A	H	I	A	D	A	I	H	Q	R	A	M	E	R	K	I	Q	V	T	E	L	D	L	Y	R	R	N	F	N	P	V	M	T	P	E	D	E	P	D	W	K	N	M	D	K	R	Y	S	P	E	V	H	Q	L	Y	S	E	L	L
Query Conservation														.	.
Alig confidence														.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	D	G	S	K	V	A	M	L	G	W	A	F	I	K	D	S	D	D	A	R	N	T	P	S	E	P	Y	R	D	L	C	L	K	A	G	A	S	V	M	V	H	D	P	Y	V	V	N	Y	P	G	V	E	I	S	D	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	E	V	V	R
Template Known Secondary structure		S	T	T								S	S	S	S	T	T		S			T	T		T												T								S	S				B	T	T	B				S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.																		.	.	410	.	.	.
		79	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	D	T	L	V	V	V	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	D	A	I	V	V	L	A	G
Template Known Secondary structure		T		S						S
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions