Job Description P43340 Confidence 100.00% Date Thu Jan 5 12:02:20 GMT 2012 Rank 12 Aligned Residues 168 % Identity 18% Template c3f2vA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:general stress protein 14; PDBTitle: crystal structure of the general stress protein 142 (tde0354) in complex with fmn from treponema denticola,3 northeast structural genomics consortium target tdr58. Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	I	Y	L	V	W	A	H	P	R	H	D	S	L	T	A	H	I	A	D	A	I	H	Q	R	A	M	E	R	K	I	Q	V	T	E	L	D	L	Y	R	R	N	F	N	P	V	M	T	P	E	D	E	P	D	W	K	N	M	D	K	R	Y	S	P	E	V	H	Q	L	Y	S	E	L	L	E	H	D	T	L
Query Conservation
Alig confidence																		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	T	L	I	I	L	A	H	P	N	I	S	Q	S	T	.	.	V	H	K	H	W	S	D	A	V	R	Q	H	T	D	R	F	T	V	H	E	L	Y	A	V	Y	P	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	D	V	A	A	E	Q	K	L	I	E	T	H	D	S	L
Template Known Secondary structure											T	T	G	G	G		S	.	.										T	T		T	T	T											T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	S	S	S
Template Predicted Secondary structure																		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.																														.	.	.	.
Query SS confidence																															.																														.	.	.	.
Query Sequence		V	V	V	F	P	L	W	W	Y	S	F	P	A	M	L	K	G	Y	I	D	R	V	W	N	N	G	L	A	Y	.	G	D	G	H	K	L	P	F	N	K	V	R	W	V	A	L	V	G	G	D	K	E	S	F	V	Q	M	G	W	.	.	.	.	E	K	N	I	S	D	Y	L	K	N	M	C	S	Y	L	G	I
Query Conservation																															.																														.	.	.	.
Alig confidence																															.																														.	.	.	.
Template Conservation
Template Sequence		V	W	Q	F	P	I	Y	W	F	N	C	P	P	L	L	K	Q	W	L	D	E	V	L	T	Y	G	W	A	Y	G	S	K	G	K	A	L	K	G	R	K	I	A	L	A	V	S	L	G	A	P	A	A	D	Y	R	A	D	G	A	V	G	C	S	V	A	E	V	L	R	P	F	E	L	T	A	K	Y	C	N	A
Template Known Secondary structure								B	T	T	B													S		B	T	T	T	B	S	S	S			S	S	T	T										S	S		G	G	G	S	S	T	T	S	S	S		S																T	T
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	A	D	V	T	F	L	C	N	T	V	V	F	D	G	E	E	L	H	A	S	Y	Y	Q	S	L	L	S	Q	V	R	D	M
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		D	Y	R	P	P	F	T	F	H	T	S	E	.	.	A	A	R	Q	E	V	E	R	S	A	R	D	Y	L	A	W	L	D	A	L
Template Known Secondary structure														.	.
Template Predicted Secondary structure														.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions