Job Description P43340 Confidence 92.52% Date Thu Jan 5 12:02:20 GMT 2012 Rank 71 Aligned Residues 115 % Identity 17% Template c2x2oA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:nrdi protein; PDBTitle: the flavoprotein nrdi from bacillus cereus with the2 initially oxidized fmn cofactor in an intermediate3 radiation reduced state Resolution 1.13 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	L	V	W	A	H	P	R	H	D	S	L	T	A	H	I	A	D	A	I	H	Q	R	A	M	E	R	K	I	Q	V	T	E	L	D	L	Y	R	R	N	F	N	P	V	M	T	P	E	D	E	P	D	W	K	N	M	D	K	R	Y	S	P	E	V	H	Q	L	Y	S	E	L	L	E	H	D	T	L	V	V
Query Conservation
Alig confidence									.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	V	A	Y	D	S	.	.	M	T	G	N	V	K	R	F	I	H	K	L	N	M	P	A	V	Q	I	D	E	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	I	D	E	D	F	I	L
Template Known Secondary structure									.	.	S	S	S										T	S							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure									.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																																									30	.	.	.	.	.	.	.	.
		86	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		V	F	P	L	W	.	W	Y	S	F	P	A	M	L	K	G	Y	I	D	R	V	W	N	N	G	L	A	Y	G	D	G	H	K	L	P	F	N	K	V	R	W	V	A	L	V	G	G	D	K	E	S	F	V	Q	M	G	W	E	K	N	I	S	D	Y	L	K	N	M	C	S	Y	L	G	I	E	D	A	D	V	T
Query Conservation							.
Alig confidence							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Sequence		I	T	Y	T	T	G	F	G	N	V	P	E	R	V	L	D	F	L	E	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	K	L	K	G	V	S	A	S	G	N	R	N	W	G	D	M	F	G	A	S	A	D	K	I	S	T	K	Y	.	.	.	.	.	.	.	E	V	P	I	V	S	K	F
Template Known Secondary structure						B	T	T	T	B													.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G										G	G	G	G	G	G	T	T											.	.	.	.	.	.	.	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.															60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.								90	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	C	N	T	V	V	F	D	G	E	E	L	H	A	S	Y	Y	Q	S	L	L	S	Q	V	R	D	M
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.
Template Sequence		E	L	S	G	T	.	.	.	.	.	.	.	.	.	N	N	D	V	E	Y	F	K	E	R	V	R	E	I
Template Known Secondary structure			T	T			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.										.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions