Job Description P43340 Confidence 99.96% Date Thu Jan 5 12:02:20 GMT 2012 Rank 23 Aligned Residues 167 % Identity 16% Template c2vzhA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-dependent fmn reductase; PDBTitle: structures of nadh:fmn oxidoreductase (emob)-fmn complex Resolution 2.5 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		R	I	Y	L	V	W	A	H	P	R	H	D	S	L	T	A	H	I	A	D	A	I	H	Q	R	A	M	E	R	.	K	I	Q	V	T	E	L	D	L	Y	R	R	N	F	N	P	V	M	T	P	E	D	E	P	D	W	K	N	M	D	K	R	Y	S	P	E	V	H	Q	L	Y	S	E	L	L	E	H	D	T	L
Query Conservation																															.
Alig confidence																															.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	V	A	I	S	G	S	P	S	R	N	S	T	T	A	K	L	A	E	Y	A	L	A	H	V	L	A	R	S	D	S	Q	G	R	H	I	H	V	I	D	L	D	P	K	A	L	L	R	G	D	L	S	N	.	.	.	.	.	.	.	.	.	.	A	K	L	K	E	A	V	D	A	T	C	N	A	D	G	L
Template Known Secondary structure										S	S	S	S																T	T	S	S								G	G	G	S								T		T	T	S	.	.	.	.	.	.	.	.	.	.														S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.											.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	V	F	P	L	W	W	Y	S	F	P	A	M	L	K	G	Y	I	D	R	V	W	N	N	G	L	A	Y	G	D	G	H	K	L	P	F	N	K	V	R	W	V	A	L	V	G	G	D	K	E	S	F	V	Q	M	G	W	E	K	N	I	S	D	Y	L	K	N	M	C	S	Y	L	G	I	E	D	A	D	V
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Sequence		I	V	A	T	P	I	Y	K	A	S	Y	T	G	L	L	K	A	F	L	D	I	L	.	.	.	.	.	.	.	.	P	Q	F	A	L	A	G	K	A	A	L	P	L	A	T	G	G	S	P	A	H	V	L	.	.	.	.	.	.	.	A	L	D	Y	G	L	R	P	V	L	H	S	M	G	V	R	H	V	V	Q
Template Known Secondary structure								B	T	T	B										T	T	S	.	.	.	.	.	.	.	.		T	T	T	T	B	T										S	S	G	G	G	G	G	.	.	.	.	.	.	.													T	T	B	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.									.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		T	F	L	C	N	T	V	V	F	D	G	E	E	L	H	.	.	.	.	A	S	Y	Y	Q	S	L	L	S	Q	V	R	D	M	V	D	A	L
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.
Template Conservation
Template Sequence		S	F	F	L	V	Q	S	Q	F	S	V	V	D	G	K	L	A	V	E	D	D	V	A	S	Q	L	N	N	A	I	D	H	F	R	L	S	L
Template Known Secondary structure							S	T	T			S	S	S	S	S	S	S	S																		T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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