Job Description P43340 Confidence 59.57% Date Thu Jan 5 12:02:20 GMT 2012 Rank 127 Aligned Residues 68 % Identity 9% Template c2uyyD_ PDB info PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac Resolution 2.5 Å

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		1	.	.	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		M	Q	S	E	.	.	R	I	Y	L	V	W	A	H	P	R	H	D	S	L	T	A	H	I	A	D	A	I	H	Q	R	A	M	E	R	K	I	Q	V	T	E	L	D	L	Y	R	R	N	F	N	P	V	M	T	P	E	D	E	P	D	W	K	N	M	D	K	R	Y	S	P	E	V	H	Q	L	Y	S	E	L	L
Query Conservation						.	.
Alig confidence						.	.						.			.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.			.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	P	T	D	K	K	I	G	F	L	.	G	L	.	.	.	.	.	.	.	G	L	M	G	S	G	I	V	S	N	L	L	K	M	G	H	T	V	T	V	W	N	R	T	A	E	K	C	D	L	F	I	Q	E	G	A	R	L	G	.	.	.	.	.	.	.	.	.	.	.	.	R	T	P	A	E	V	V	S
Template Known Secondary structure						S	S						.			.	.	.	.	.	.	.	S													T	T								S	S	G	G	G	G						T	T					.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure													.			.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.		.	.								.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.													.	.	.	.	.	320	.	.
		79	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	D	T	L	V	V	V	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	C	D	I	T	F	A	C	V	S
Template Known Secondary structure				S							S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions