Job Description P43340 Confidence 21.66% Date Thu Jan 5 12:02:20 GMT 2012 Rank 289 Aligned Residues 86 % Identity 13% Template c2nvwB_ PDB info PDB header:transcription Chain: B: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal sctucture of transcriptional regulator gal80p from2 kluyveromymes lactis Resolution 2.10 Å

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		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		M	Q	S	E	R	I	Y	L	.	V	W	A	H	P	R	H	D	S	L	T	A	H	I	A	D	A	I	H	Q	R	A	M	E	R	K	I	Q	V	T	E	L	D	L	Y	R	R	N	F	N	P	V	M	T	P	E	D	E	P	D	W	K	N	M	D	K	R	Y	S	P	E	V	H	Q	L	Y	S	E	L	L	E
Query Conservation										.
Alig confidence										.					.	.	.																																																			.	.										.
Template Conservation															.	.	.																																																			.	.										.
Template Sequence		A	S	S	R	P	I	R	V	G	F	V	G	L	.	.	.	T	S	G	K	S	W	V	A	K	T	H	F	L	A	I	Q	Q	L	S	S	Q	F	Q	I	V	A	L	Y	N	P	T	L	K	S	S	L	Q	T	I	E	Q	L	Q	L	K	H	A	T	G	F	.	.	D	S	L	E	S	F	A	Q	Y	.	K	D
Template Known Secondary structure					S								S		.	.	.		S	T	T	S					T								T	T	T	T									S	S											T	T		T	T					.	.	S									.	T	T
Template Predicted Secondary structure															.	.	.																																																			.	.										.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.		.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	T	L	V	V	V	F	P	L	W	W	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	M	I	V	V	S	V	K	V	P	E	H
Template Known Secondary structure			S						S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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