Job Description P43340 Confidence 27.50% Date Thu Jan 5 12:02:20 GMT 2012 Rank 247 Aligned Residues 105 % Identity 14% Template c2i80B_ PDB info PDB header:ligase Chain: B: PDB Molecule:d-alanine-d-alanine ligase; PDBTitle: allosteric inhibition of staphylococcus aureus d-alanine:d-alanine2 ligase revealed by crystallographic studies Resolution 2.19 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure															.																													.	.	.	.
Query SS confidence															.																													.	.	.	.
Query Sequence		E	R	I	Y	L	V	W	A	H	P	R	H	D	.	S	L	T	A	H	I	A	D	A	I	H	Q	R	A	M	E	R	K	I	Q	V	T	E	L	D	L	Y	R	.	.	.	.	R	N	F	N	P	V	M	T	P	E	D	E	P	D	W	K	N	M	D	K	R	Y	S	P	E	V	H	Q	L	Y	S	E	L	L
Query Conservation															.																													.	.	.	.
Alig confidence															.																													.	.	.	.
Template Conservation
Template Sequence		E	N	I	C	I	V	F	G	G	K	S	A	E	H	E	V	S	I	L	T	A	Q	N	V	L	N	A	I	D	K	D	K	Y	H	V	D	I	I	Y	I	T	N	D	G	D	W	R	K	Q	N	N	I	T	A	E	I	K	S	T	D	E	L	H	L	E	N	G	E	A	L	E	I	S	Q	L	L	K	E	S	S
Template Known Secondary structure											S	S	T	T															S		T	T	T										T	T	S										S					G	G	G	G	S		S					S										T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		79	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		E	H	D	T	.	.	L	V	V	V	F	P	L	W	W	Y	S	F	P	A	M	L	K	G	Y	I	D	R	V	W	N	N
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		S	G	Q	P	Y	D	A	V	F	P	L	L	H	G	P	N	G	E	D	G	T	I	Q	G	L	F	E	V	L	D	V	P
Template Known Secondary structure		T	S	S			S						S		B	T	T	T	B	S	S										T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions