Job Description P43340 Confidence 65.49% Date Thu Jan 5 12:02:20 GMT 2012 Rank 112 Aligned Residues 122 % Identity 11% Template c2eggA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.										.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.
Query Sequence		M	Q	S	E	R	I	Y	L	V	W	A	H	P	R	H	D	S	L	T	A	H	I	A	D	A	I	H	Q	R	A	M	E	R	K	I	Q	V	T	E	L	D	L	Y	R	R	N	F	N	.	.	.	.	.	.	.	.	.	P	V	M	T	P	E	D	E	P	D	W	K	N	M	D	K	R	Y	S	P	E	V	H
Query Conservation																																																		.	.	.	.	.	.	.	.	.
Alig confidence				.	.																													.																.	.	.	.	.	.	.	.	.
Template Conservation				.	.																													.
Template Sequence		M	E	.	.	K	V	Y	G	L	I	G	F	P	V	E	H	S	L	S	P	L	M	H	N	D	A	F	A	R	L	G	I	.	P	A	R	Y	H	L	F	S	V	E	P	G	Q	V	G	A	A	I	A	G	V	R	A	L	G	I	A	G	V	N	V	T	I	P	H	K	L	A	V	I	P	F	L	D	E	V	D
Template Known Secondary structure				.	.								S	S		T	T		S												T	T		.											T	T													T								T	T		T	T	T	T	G	G	G		S
Template Predicted Secondary structure				.	.																													.
Template SS confidence
		22	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		Q	L	Y	S	E	L	L	E	H	D	T	L	V	V	V	F	P	.	.	.	L	W	W	Y	S	F	P	A	M	L	K	G	Y	I	D	R	V	W	N	N	G	L	A	Y	G	D	G	H	K	L	P	F	N	K	V	R	W	V	A	L	V	G	G	D	K	E
Query Conservation																			.	.	.
Alig confidence																			.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.
Template Sequence		E	H	A	R	R	I	G	A	V	N	T	I	I	N	N	D	G	R	L	V	G	Y	N	T	D	G	L	G	Y	V	Q	A	L	E	E	E	M	.	.	.	.	.	.	.	.	.	N	I	T	L	D	G	K	R	I	L	V	I	G	A	G	G	G	A	R	G
Template Known Secondary structure								T									T	T																				T	.	.	.	.	.	.	.	.	.	T				T	T									S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.										.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions