Job Description P43340 Confidence 99.54% Date Thu Jan 5 12:02:20 GMT 2012 Rank 42 Aligned Residues 145 % Identity 6% Template c1vmeB_ PDB info PDB header:electron transport Chain: B: PDB Molecule:flavoprotein; PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution Resolution 1.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	I	Y	L	V	W	A	H	P	R	H	D	S	L	T	A	H	I	A	D	A	I	H	Q	R	A	M	E	R	K	I	Q	V	T	E	L	D	L	Y	R	R	N	F	N	P	V	M	T	P	E	D	E	P	D	W	K	N	M	D	K	R	Y	S	P	E	V	H	Q	L	Y	S	E	L	L	E	H	D	T	L
Query Conservation
Alig confidence											.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	V	T	V	I	Y	D	S	.	.	X	Y	G	F	V	E	N	V	X	K	K	A	I	D	S	L	K	E	K	G	F	T	P	V	V	Y	K	F	S	D	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	A	I	S	E	I	L	K	D	I	P	D	S	E	A	L
Template Known Secondary structure		T									.	.	S	S	S																T	T										S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	T	T		S
Template Predicted Secondary structure											.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.																					.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	V	F	P	L	W	W	Y	S	F	P	A	M	L	K	G	Y	I	D	R	V	W	N	N	G	L	A	Y	G	D	G	H	K	L	P	F	N	K	V	R	W	V	A	L	V	G	G	D	K	E	S	F	V	Q	M	G	W	E	K	N	I	S	D	Y	L	K	N	M	C	S	Y	L	G	I	E	D	A	D	V
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	G	V	S	T	Y	E	A	E	I	H	P	L	X	R	F	T	L	L	E	I	.	.	.	.	.	.	.	.	I	D	K	A	N	Y	E	K	P	V	L	V	F	G	V	H	G	W	A	P	S	A	E	R	.	.	.	.	.	.	.	.	.	.	T	A	G	E	L	L	K	E	T	K	F	R	I	L	S	F
Template Known Secondary structure									T	T														.	.	.	.	.	.	.	.																					T	T	S		.	.	.	.	.	.	.	.	.	.								T	S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.									.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.											.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	L	C	N	T	V	V	F	D	G	E	E	L	H	A	S	Y	Y	Q	S	L	L	S	Q	V	R	D	M	V	D
Query Conservation
Alig confidence										.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		T	E	I	K	G	S	N	X	.	.	.	.	.	.	D	E	R	K	I	E	E	A	I	S	L	L	K	K	E	L	E
Template Known Secondary structure						S	S	S		.	.	.	.	.	.		T
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		374	.	.	.	.	.	380	.							.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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