Job Description P43340 Confidence 52.23% Date Thu Jan 5 12:02:20 GMT 2012 Rank 151 Aligned Residues 97 % Identity 15% Template c1gdhA_ PDB info PDB header:oxidoreductase(choh (d)-nad(p)+ (a)) Chain: A: PDB Molecule:d-glycerate dehydrogenase; PDBTitle: crystal structure of a nad-dependent d-glycerate2 dehydrogenase at 2.4 angstroms resolution Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	R	I	Y	L	V	W	A	H	P	R	H	D	S	L	T	A	H	I	A	D	A	I	H	Q	R	A	M	E	R	K	I	Q	V	T	E	L	D	L	Y	R	R	N	F	N	P	V	M	T	P	E	D	E	P	D	W	K	N	M	D	K	R	Y	S	P	E	V	H	Q	L	Y	S	E	L	L	E	H	D	T
Query Conservation
Alig confidence												.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	N	K	T	L	G	I	Y	G	F	.	.	.	.	.	.	.	G	S	I	G	Q	A	L	A	K	R	A	Q	G	F	D	M	D	I	D	Y	F	D	T	H	R	A	S	S	S	D	E	A	S	Y	Q	A	T	F	H	.	.	.	.	.	.	.	.	.	.	.	.	D	S	L	D	S	L	L	S	V	S	Q	F
Template Known Secondary structure		T	T									.	.	.	.	.	.	.	S												T	T	T								S	S											T					.	.	.	.	.	.	.	.	.	.	.	.	S	S									S
Template Predicted Secondary structure												.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.													.	.	.	.	.	200	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	V	V	F	P	L	W	W	Y	S	F	P	A	M	L	K	G	Y	I	D	R	V	W	N	N	G	L	A	Y	G	D	G	H	K	L	P	F	N	K	V	R	W	V	A	L	V	G	G	D	K
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	S	L	N	A	P	S	T	P	E	T	R	Y	F	F	N	K	A	T	I	K	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	G	A	I	V	V	N	T	A	R	G	D
Template Known Secondary structure										T	T	T	T	T		B	S					T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T							S		G	G
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.																230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions