Return to main results Retrieve Phyre Job Id

Job DescriptionP77601
Confidence34.56%DateThu Jan 5 12:30:56 GMT 2012
Rank411Aligned Residues62
% Identity19%Templatec3pvpA_
PDB info PDB header:dna binding protein/dnaChain: A: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of mycobacterium tuberculosis dnaa-dbd in complex with box22 dna
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60......... 70......... 80.........90.........100......
Predicted Secondary structure 





.......
.







Query SS confidence 

























. . . . . . .









.


























Query Sequence  YSRRNIQLLFRNFMHVPLGEYIRKRR. . . . . . . LCRAAILVRL. TAKSMLDIALSLHFDSQQSFSREFKKL
Query Conservation   
   
 
 

   
 
   

   
.......
  
   
  .    
 


   

 
   





  
Alig confidence 

























.......









.












.












Template Conservation 

 
 

  

  
 
    
 
  
   
  

 




 
     
   

  

.





  
  

Template Sequence  ISAATIMAATAEYFDTTVEELRGPGKTRALAQSRQIAMYLCRELTDLSLPKIGQAFG. RDHTTVMYAQRKI
Template Known Secondary structure 

TT

SS






TT.

Template Predicted Secondary structure 


















.

Template SS confidence 






































































   411........420.........430.........440.........450.........460....... ..470.........480
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions