Job Description P77601 Confidence 98.18% Date Thu Jan 5 12:30:56 GMT 2012 Rank 18 Aligned Residues 89 % Identity 10% Template c3lurB_ PDB info PDB header:transcription activator Chain: B: PDB Molecule:putative bacterial transcription regulation protein; PDBTitle: crystal structure of putative bacterial transcription regulation2 protein (np_372959.1) from staphylococcus aureus mu50 at 1.81 a3 resolution Resolution 1.81 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.										180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.
Query Sequence		T	E	C	R	L	I	N	F	P	E	T	P	I	F	G	N	S	F	K	Y	D	I	E	V	S	N	K	S	P	D	E	E	V	K	L	R	R	H	H	L	A	R	C	.	.	.	.	.	.	.	.	.	M	K	N	F	K	T	D	I	Y	F	V	S	T	F	E	P	S	T	K	S	V	D	L	L	T	V	E	T
Query Conservation																																													.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.															.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																												.	.	.																																											.	.	.	.	.	.
Template Sequence		X	E	Y	Q	L	Q	Q	L	A	S	L	T	L	V	G	I	K	E	T	Y	E	N	G	R	Q	A	.	.	.	Q	Q	H	I	A	G	F	W	Q	R	C	Y	Q	E	G	V	I	A	D	L	Q	L	K	N	N	G	D	L	A	G	I	L	G	L	C	I	P	E	L	D	G	K	.	.	.	.	.	.	X	S	Y
Template Known Secondary structure																						S	S					.	.	.														T	T											S	S	S	S	S									S	S	S		.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.																																											.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		F	A	G	T	V	C	E	Y	A	D	M	P	K	E	W	.	.	.	T	T	T	R	G	L	Y	D	P	T	H	V
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		X	I	A	V	T	G	D	N	S	A	D	I	A	K	Y	D	V	I	T	L	A	S	S	K	Y	X	V	F	E	A
Template Known Secondary structure									T	T	S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions