Job Description P77601 Confidence 31.13% Date Thu Jan 5 12:30:56 GMT 2012 Rank 426 Aligned Residues 116 % Identity 12% Template c3hefB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:gene 1 protein; PDBTitle: crystal structure of the bacteriophage sf6 terminase small2 subunit Resolution 1.65 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																												.																																																			.	.	.
Query SS confidence																												.																																																			.	.	.
Query Sequence		Q	Q	L	L	E	W	I	E	C	N	L	E	H	P	I	S	I	E	D	I	A	Q	K	S	G	Y	.	S	R	R	N	I	Q	L	L	F	R	N	F	M	H	V	P	L	G	E	Y	I	R	K	R	R	L	C	R	A	A	I	L	V	R	L	T	A	K	S	M	L	D	I	A	L	S	L	H	F	D	.	.	.
Query Conservation																												.																																																			.	.	.
Alig confidence																												.													.	.	.	.	.																					.													.	.	.
Template Conservation																																									.	.	.	.	.																					.
Template Sequence		P	E	V	A	D	D	I	C	S	L	L	S	S	G	E	S	L	L	K	V	C	K	R	P	G	M	P	D	K	S	T	V	F	R	W	L	A	K	H	.	.	.	.	.	E	D	F	R	D	K	Y	A	K	A	T	E	A	R	A	D	S	I	F	E	.	E	I	F	E	I	A	D	N	A	I	P	D	A	A	E
Template Known Secondary structure														T	T							T	T	S	T	T															.	.	.	.	.																					.								T			S	S
Template Predicted Secondary structure																																									.	.	.	.	.																					.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
					95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	S	Q	Q	S	F	S	R	E	F	K	K	L	F	G	C	S	P	R	E	Y	R	H	R	D	Y	W	D	L	A	N	I	F	P	S	F	L	I	R	Q	Q	Q	K	T	E	C	R	L	I	N	F	P	E	T
Query Conservation		.	.	.
Alig confidence		.	.	.																								.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.
Template Sequence		V	A	K	A	R	L	R	V	D	T	R	K	W	A	L	A	R	M	N	P	R	K	Y	G	D	K	.	.	.	.	.	.	.	V	T	N	E	L	V	G	K	D	G	G	A	I	Q	I	E	T	S	P	M	S	T	L
Template Known Secondary structure																									S			.	.	.	.	.	.	.								G	G	G	S										S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions