Return to main results Retrieve Phyre Job Id

Job DescriptionP77601
Confidence98.53%DateThu Jan 5 12:30:56 GMT 2012
Rank17Aligned Residues100
% Identity10%Templatec3gk6A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:integron cassette protein vch_cass2; PDBTitle: crystal structure from the mobile metagenome of vibrio cholerae.2 integron cassette protein vch_cass2.
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170.........180. ........190.........200........
Predicted Secondary structure 



















...














Query SS confidence 

















































. . .


























Query Sequence  RQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMK. . . NFKTDIYFVSTFEPSTKSVDLLTVETF
Query Conservation           
       
                                ...       

  
 
  
  
  
    
Alig confidence 

















































...













...









Template Conservation           

   

 



  
     
       

  
                  

     ...        
 
Template Sequence  ENLYFQGXNISEINGFEVTGFVVRTTNADEXNPXTAKIGNLWEKFYLNAAPKLTDKSKVYGLYTNYE. . . SDFTGAFDVI
Template Known Secondary structure 





STTT

TGGG

TT



S...SSTTS
Template Predicted Secondary structure 


























...





Template SS confidence 















































































  
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions