Job Description P77601 Confidence 99.95% Date Thu Jan 5 12:30:56 GMT 2012 Rank 2 Aligned Residues 99 % Identity 19% Template c3gbgA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	Q	Q	L	L	E	W	I	E	C	N	L	E	H	P	I	S	I	E	D	I	A	Q	K	S	G	Y	S	R	R	N	I	Q	L	L	F	R	N	F	M	H	V	P	L	G	E	Y	I	R	K	R	R	L	C	R	A	A	I	L	V	R	L	T	A	K	S	M	L	D	I	A	L	S	L	H	F	D	S	Q
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		A	M	E	K	I	S	C	L	V	K	S	D	I	T	R	N	W	R	W	A	D	I	C	G	E	L	R	T	N	R	M	I	L	K	K	E	L	E	S	.	R	G	V	K	F	R	E	L	I	N	S	I	R	I	S	Y	S	I	S	L	M	K	T	G	E	F	K	I	K	Q	I	A	Y	Q	S	G	F	A	S	V
Template Known Secondary structure													T	T	T	S												T												T	.	T	T																						T											T	T		S
Template Predicted Secondary structure																																									.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	F	S	R	E	F	K	K	L	F	G	C	S	P	R	E	Y	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	F	S	T	V	F	K	S	T	M	N	V	A	P	S	E	Y	L	F
Template Known Secondary structure													S	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions