Return to main results Retrieve Phyre Job Id

Job DescriptionP77601
Confidence81.26%DateThu Jan 5 12:30:56 GMT 2012
Rank195Aligned Residues38
% Identity18%Templatec3e7lD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23...... 30.........40.........50.........60.
Predicted Secondary structure 
.











Query SS confidence 






.































Query Sequence  EWIECNL. EHPISIEDIAQKSGYSRRNIQLLFRNFMHVPL
Query Conservation    
   
.   
 
  

     
   
 
 

   
 
 
Alig confidence 






.


























.



Template Conservation    
  

    

   

  


 
 

  



 .

  
Template Sequence  IFIEEKLREYDYDLKRTAEEIGIDLSNLYRKIKSL. NIRV
Template Known Secondary structure  TTT
TT

T.T


Template Predicted Secondary structure 





.



Template SS confidence 







































   38.40.........50.........60.........70.. ....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions