Job Description P77601 Confidence 78.27% Date Thu Jan 5 12:30:56 GMT 2012 Rank 203 Aligned Residues 82 % Identity 15% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.									.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.																																					.
Query SS confidence																																					.	.	.	.	.	.	.	.																																					.
Query Sequence		E	W	I	E	C	N	L	E	H	P	I	S	I	E	D	I	A	Q	K	S	G	Y	S	R	R	N	I	Q	L	L	F	R	N	F	M	.	.	.	.	.	.	.	.	H	V	P	L	G	E	Y	I	R	K	R	R	L	C	R	A	A	I	L	V	R	L	T	A	K	S	M	L	D	I	A	L	S	L	H	F	.
Query Conservation																																					.	.	.	.	.	.	.	.																																					.
Alig confidence																																					.	.	.	.	.	.	.	.				.	.																																.
Template Conservation																																																.	.
Template Sequence		A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	.	.	K	A	L	S	V	R	D	E	R	N	V	I	R	A	A	S	N	S	C	K	T	A	R	D	I	R	N	E	L	Q	L	S
Template Known Secondary structure										T	T											T												S	G	G	G	T	T									.	.		S	S																										T	T
Template Predicted Secondary structure																																																.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		94	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	Q	Q	S	F	S	R	E	F	K	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	K	R	T	I	L	N	V	I	K	R	S
Template Known Secondary structure		S												T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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