Return to main results Retrieve Phyre Job Id

Job DescriptionP64554
Confidence21.29%DateWed Jan 25 15:21:00 GMT 2012
Rank122Aligned Residues49
% Identity12%Templatec3bc9A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha amylase, catalytic region; PDBTitle: alpha-amylase b in complex with acarbose
Resolution1.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   166...170.........180.........190.. .......200.........210...
Predicted Secondary structure 












................................




Query SS confidence 


























. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .




















Query Sequence  RDIEALDELLATLTDDKPRVIALQPIS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QKDDATRLCIETCIARNWRLS
Query Conservation       
              
 
    ................................ 
 
                 
Alig confidence 


























................................




















Template Conservation              
  

 
 


 
           

   
  

        
    

  

  

  

  




Template Sequence  NLWNLLAERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVY
Template Known Secondary structure  GT





STTGGG

S
STT
SS
S
BTTBSSBTTB
TT
Template Predicted Secondary structure 













































Template SS confidence 















































































   147..150.........160.........170.........180.........190.........200.........210.........220......
 
   214
Predicted Secondary structure 
Query SS confidence 
Query Sequence  M
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  F
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   227
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions