Job Description P64554 Confidence 89.80% Date Wed Jan 25 15:21:00 GMT 2012 Rank 13 Aligned Residues 147 % Identity 10% Template c2qgqF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:protein tm_1862; PDBTitle: crystal structure of tm_1862 from thermotoga maritima.2 northeast structural genomics consortium target vr77 Resolution 2.00 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.									.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.
Query Sequence		C	A	W	C	D	T	K	H	T	W	E	K	L	E	D	R	E	V	S	L	F	S	I	L	A	K	T	K	E	S	D	K	W	G	A	A	S	S	E	D	L	L	A	V	I	G	R	Q	G	Y	T	A	R	H	V	V	I	T	G	G	E	P	C	.	.	.	.	.	.	.	.	I	H	D	L	L	P	L	T	D
Query Conservation																																																																	.	.	.	.	.	.	.	.
Alig confidence											.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation											.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	Y	A	Y	V	K	I	S	.	.	D	G	S	L	R	S	R	S	I	E	D	I	T	R	E	V	E	D	L	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	K	K	E	I	I	L	V	A	Q	D	T	T	S	Y	G	I	D	L	Y	R	K	Q	A	L	P	D	L	L	R
Template Known Secondary structure			S							B	.	.						B																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T									S		G	G	G	T	T	T	T	T	T	S	S
Template Predicted Secondary structure											.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.													.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	E	K	N	G	F	S	C	Q	I	E	T	S	G	T	H	E	V	R	.	.	.	.	.	.	.	.	.	.	.	.	C	T	P	N	T	W	V	T	V	S	P	K	L	N	M	R	G	G	Y	E	V	L	S	Q	A	L	E	R	A	N	E	I	K	H	P	V	G	R	V	R	D	I	E	A	L	D	E	L
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	N	S	L	N	G	E	F	W	I	R	V	X	Y	L	H	P	D	H	L	T	E	E	I	I	S	A	X	L	E	L	D	K	V	V	K	Y	F	D	V	P	V	Q	H	G	S	D	K	I	L	K	L	X	G	R	T	K	S	S	.	.	.	.	.	.	.	.	.	.	E	E	L	K	K	X	L	S	S	I
Template Known Secondary structure					T	S	S	S	S										G	G	G													T	T	B		S							B		S									T			S			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.											.	.	.	.	.	.	.	280	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		L	A	T	L	T	D	D	K	P	R	V	I	A	L	Q	P	I	.	S	Q	K	D	D	A	T	R	L	C	I	E	T	C	I	A	R	N	W
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		R	E	R	F	P	D	A	V	L	R	T	S	I	I	V	G	F	P	G	E	T	E	E	D	F	E	E	L	K	Q	F	V	E	E	I	Q	F
Template Known Secondary structure						T	T										S		T	T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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