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Job DescriptionP64554
Confidence23.77%DateWed Jan 25 15:21:00 GMT 2012
Rank114Aligned Residues55
% Identity13%Templatec1jaeA_
PDB info PDB header:glycosidaseChain: A: PDB Molecule:alpha-amylase; PDBTitle: structure of tenebrio molitor larval alpha-amylase
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   160.........170....... ..180.........190.. .......200.........210...
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Query Sequence  HPVGRVRDIEALDELLAT. LTDDKPRVIALQPIS. . . . . . . . . . . . . . . . . . . . . . . . . QKDDATRLCIETCIARNWRLS
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Template Sequence  IVHLFEWKWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIY
Template Known Secondary structure  TT

TTTTTT



S
BB

TT

GGGGGSB

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STTTT
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   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   214
Predicted Secondary structure 
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Query Sequence  M
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Template Conservation 
Template Sequence  V
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   93
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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