Job Description P32170 Confidence 100.00% Date Thu Jan 5 11:49:48 GMT 2012 Rank 4 Aligned Residues 340 % Identity 15% Template d1xlma_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 2.40

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		36	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		S	M	H	C	W	.	Q	G	D	D	V	S	G	F	E	N	P	E	G	S	L	T	G	G	I	Q	A	T	G	N	Y	P	G	K	A	R	N	A	S	E	L	R	A	D	L	E	Q	A	M	R	L	I	P	G	P	K	R	L	N	L	H	A	I	Y	L	E	S	D	T	P	V	S	R	D	Q	I	K	P	E	H
Query Conservation							.
Alig confidence							.								.	.	.	.		.	.	.	.	.	.	.	.	.	.	.	.																						.	.									.	.	.	.	.
Template Conservation															.	.	.	.		.	.	.	.	.	.	.	.	.	.	.	.																						.	.									.	.	.	.	.
Template Sequence		T	F	G	L	W	T	V	G	W	T	G	A	D	.	.	.	.	P	.	.	.	.	.	.	.	.	.	.	.	.	F	G	V	A	T	R	K	N	L	D	P	V	E	A	V	H	K	L	A	E	L	.	.	G	A	Y	G	I	T	F	H	.	.	.	.	.	D	N	D	L	I	P	F	D	A	T	E	A	E	R
Template Known Secondary structure									T					B	.	.	.	.	T	.	.	.	.	.	.	.	.	.	.	.	.	T	B				S																.	.	T								.	.	.	.	.					S		T	T
Template Predicted Secondary structure															.	.	.	.		.	.	.	.	.	.	.	.	.	.	.	.																						.	.									.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.					.													.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.
					115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.
Predicted Secondary structure		.	.	.																	.																																																										.
Query SS confidence		.	.	.																	.																																																										.
Query Sequence		.	.	.	F	K	N	W	V	E	W	A	K	A	N	Q	L	G	L	D	.	F	N	P	S	C	F	S	H	P	L	S	A	D	G	F	T	L	S	H	A	D	D	S	I	R	Q	F	W	I	D	H	C	K	A	S	R	R	V	S	A	Y	F	G	E	Q	L	G	T	P	S	V	M	N	I	W	I	P	.	D	G
Query Conservation		.	.	.																	.																																																										.
Alig confidence		.	.	.																	.															.																															.	.	.	.	.								.
Template Conservation																																				.																															.	.	.	.	.
Template Sequence		E	K	I	L	G	D	F	N	Q	A	L	K	D	T	G	L	K	V	P	M	V	T	T	N	L	F	S	H	P	V	F	K	D	G	.	G	F	T	S	N	D	R	S	I	R	R	F	A	L	A	K	V	L	H	N	I	D	L	A	A	E	M	G	A	E	.	.	.	.	.	T	F	V	M	W	G	G	R	E	G
Template Known Secondary structure																T											S	S	S	G	G	G	T	T		.	S	T	T		S	S																						T		S	.	.	.	.	.							S	S	S
Template Predicted Secondary structure																																				.																															.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.
		190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.
Predicted Secondary structure														.																	.	.	.																													.														.	.
Query SS confidence														.																	.	.	.																													.														.	.
Query Sequence		M	K	D	I	T	V	D	R	L	A	P	R	.	Q	R	L	L	A	A	L	D	E	V	I	S	E	K	L	N	.	.	.	P	A	H	H	I	D	A	V	E	S	K	L	F	G	I	G	A	E	S	Y	T	V	G	S	N	E	F	Y	.	M	G	Y	A	T	S	R	Q	T	A	L	C	L	.	.	D	A	G	H
Query Conservation														.																	.	.	.																													.														.	.
Alig confidence														.																	.	.	.						.	.																						.														.	.
Template Conservation																																							.	.
Template Sequence		S	E	Y	D	G	S	K	D	L	A	A	A	L	D	R	M	R	E	G	V	D	T	A	A	G	Y	I	K	D	K	G	Y	N	L	R	I	A	.	.	L	E	P	K	P	N	E	P	R	G	D	I	F	L	P	T	V	G	H	G	L	A	F	I	E	Q	L	E	H	G	D	I	V	G	L	N	P	E	T	G	H
Template Known Secondary structure			S	S	G	G	G																									T		S					.	.					S		S	S	S	S			S	S		S									T	T		T	T	G	G	G						B
Template Predicted Secondary structure																																							.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.					.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																							.											.	.							.	.																	.	.	.	.
Query SS confidence																							.											.	.							.	.																	.	.	.	.
Query Sequence		F	H	P	T	E	V	I	S	D	K	I	S	A	A	M	L	Y	V	P	Q	L	.	L	L	H	V	S	R	P	V	R	W	.	.	D	S	D	H	V	V	.	.	L	L	D	D	E	T	Q	A	I	A	S	E	I	V	R	H	.	.	.	.	D	L	F	D	R	V	H	I	G	L	D	F	F	D	A	S	I	N
Query Conservation																							.											.	.							.	.																	.	.	.	.
Alig confidence																							.											.	.							.	.																	.	.	.	.
Template Conservation
Template Sequence		E	Q	M	A	G	L	N	F	T	H	G	I	A	Q	A	L	W	A	E	K	L	F	H	I	D	L	N	G	Q	R	G	I	K	Y	E	Q	E	L	V	F	G	H	G	D	L	T	S	A	F	F	T	V	D	L	L	E	N	G	F	P	N	G	G	P	K	Y	T	G	P	R	H	F	D	Y	K	P	S	R	T	D
Template Known Secondary structure				T	T	T													T	T		B							B			S	S	S	S				B		T	T	S	S																	T	T							S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		R	I	A	A	W	V	I	G	T	R	N	M	K	K	A	L	L	R	A	L	L	E	P	T	A	E	L	R	K	L	E	A	A	G	D	Y	T	A	R	L	A	L	L	E	E	Q	K	S	L	P	W	Q	A	V	W	E	M	Y	C	Q	R	H	D	T	P	A	G	S	E	W	L	E	S	V	R	A	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																		.	.	.										.	.	.	.	.	.	.	.																																	.	.							.	.	.	.
Template Conservation																		.	.	.										.	.	.	.	.	.	.	.																																	.	.
Template Sequence		G	Y	D	G	V	W	D	S	A	K	A	N	M	S	M	Y	.	.	.	L	L	L	K	E	R	A	L	A	.	.	.	.	.	.	.	.	F	R	A	D	P	E	V	Q	E	A	M	K	T	S	G	V	F	E	L	G	E	T	T	L	N	A	G	E	S	A	A	D	.	.	L	M	N	D	S	A	S	F	A	G
Template Known Secondary structure																		.	.	.										.	.	.	.	.	.	.	.															T	T	T	G	G	G	S		S	S		T	T						.	.			T		G	G	G	T	T	T
Template Predicted Secondary structure																		.	.	.										.	.	.	.	.	.	.	.																																	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.	.									.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	K	E	I	L	S	R	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	A	E	A	A	A	E	R	N
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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