Job Description P32170 Confidence 99.97% Date Thu Jan 5 11:49:48 GMT 2012 Rank 10 Aligned Residues 308 % Identity 14% Template d1qt1a_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 1.85

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		34	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		P	V	S	M	H	C	W	.	Q	G	D	D	V	S	G	F	E	N	P	E	G	S	L	T	G	G	I	Q	A	T	G	N	Y	P	G	K	A	R	N	A	S	E	L	R	A	D	L	E	Q	A	M	R	L	I	P	G	P	K	R	L	N	L	H	A	I	Y	L	E	S	D	T	P	V	S	R	D	Q	I	K	P
Query Conservation									.
Alig confidence									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.										.	.													.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.										.	.													.	.	.	.	.
Template Sequence		K	F	T	F	G	L	W	T	V	G	W	Q	G	R	D	P	F	G	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	G	A	L	D	P	A	.	.	E	S	V	R	R	L	A	E	L	.	.	G	A	H	G	V	T	F	H	D	D	D	L	.	.	.	.	.	I	P	F	G	A	T	D	S
Template Known Secondary structure											T					B	T	T	B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S							.	.										.	.	T												.	.	.	.	.	S		T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.										.	.													.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.															.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.
		113	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.																	.																																																										.
Query SS confidence				.	.	.																	.																																																										.
Query Sequence		E	H	.	.	.	F	K	N	W	V	E	W	A	K	A	N	Q	L	G	L	D	.	F	N	P	S	C	F	S	H	P	L	S	A	D	G	F	T	L	S	H	A	D	D	S	I	R	Q	F	W	I	D	H	C	K	A	S	R	R	V	S	A	Y	F	G	E	Q	L	G	T	P	S	V	M	N	I	W	I	P	.
Query Conservation				.	.	.																	.																																																										.
Alig confidence				.	.	.																	.															.																								.	.	.	.											.					.
Template Conservation																																						.																								.	.	.	.											.
Template Sequence		E	R	A	E	H	I	K	R	F	R	Q	G	L	D	E	T	G	M	K	V	P	M	A	T	T	N	L	F	T	H	P	V	F	K	D	G	.	G	F	T	A	N	D	R	D	V	R	R	Y	A	L	R	K	T	I	R	N	I	D	L	.	.	.	.	A	V	E	L	G	A	Q	T	Y	V	.	A	W	G	G	R
Template Known Secondary structure																		T											S	S	S	G	G	G	T	T		.	S	T	T		S	S																		.	.	.	.					T		S				.				T	T
Template Predicted Secondary structure																																						.																								.	.	.	.											.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.		.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.			.	260
Predicted Secondary structure																.																	.	.	.																													.														.	.
Query SS confidence																.																	.	.	.																													.														.	.
Query Sequence		D	G	M	K	D	I	T	V	D	R	L	A	P	R	.	Q	R	L	L	A	A	L	D	E	V	I	S	E	K	L	N	.	.	.	P	A	H	H	I	D	A	V	E	S	K	L	F	G	I	G	A	E	S	Y	T	V	G	S	N	E	F	Y	.	M	G	Y	A	T	S	R	Q	T	A	L	C	L	.	.	D	A
Query Conservation																.																	.	.	.																													.														.	.
Alig confidence																.																	.	.	.						.	.																						.														.	.
Template Conservation																																									.	.
Template Sequence		E	G	A	E	S	G	A	A	K	D	V	R	V	A	L	D	R	M	K	E	A	F	D	L	L	G	E	Y	V	T	S	Q	G	Y	D	T	P	F	A	.	.	I	E	P	K	P	N	E	P	R	G	D	I	L	L	P	T	I	G	H	A	L	A	F	I	D	G	L	E	R	P	E	L	Y	G	V	N	P	E	V
Template Known Secondary structure		S			S	S	S	S	S																									T							.	.					S	S	S	S	S	S			S	S		S									T	T	S	S	S	G	G	G						B
Template Predicted Secondary structure																																									.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																									.											.	.							.	.
Query SS confidence																									.											.	.							.	.
Query Sequence		G	H	F	H	P	T	E	V	I	S	D	K	I	S	A	A	M	L	Y	V	P	Q	L	.	L	L	H	V	S	R	P	V	R	W	.	.	D	S	D	H	V	V	.	.	L	L	D	D	E	T	Q	A	I	A	S	E	I	V	R	H	D	L	F	D	R	V	H	I	G	L	D	F	F	D	A	S	I	N	R	I
Query Conservation																									.											.	.							.	.
Alig confidence																									.											.	.							.	.																								.	.
Template Conservation																																																																					.	.
Template Sequence		G	H	E	Q	M	A	G	L	N	F	P	H	G	I	A	Q	A	L	W	A	G	K	L	F	H	I	D	L	N	G	Q	S	G	I	K	Y	D	Q	D	L	R	F	G	P	G	D	L	R	A	A	F	W	L	V	D	L	L	E	S	A	G	Y	E	G	P	R	H	.	.	F	D	F	K	P	P	R	T	E	D	F
Template Known Secondary structure						T	T	T													T	T		B							B			S	S	S	S				B		S	S	S	S	S															T			S				.	.							T	T
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	W	V	I	G	T	R	N	M	K	K	A	L	L	R	A	L	L	E	P	T	A	E	L	R	K	L	E	A	A	G	D	Y	T	A	R	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	V	W	A	S	A	A	G	C	M	R	N	Y	L	I	L	K	E	R	A	A	A	F	R	A	D	P	E	V	Q	E	A	L	R	A	A	R	L
Template Known Secondary structure																																						T	T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions