Return to main results Retrieve Phyre Job Id

Job DescriptionP32170
Confidence33.07%DateThu Jan 5 11:49:48 GMT 2012
Rank64Aligned Residues57
% Identity32%Templated1cyga4
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120......... 130........ .140......
Predicted Secondary structure 




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Query Sequence  KPEHFKNWVEWAKANQLGL. . DFNPSCFSH. . . . . PLSADGFT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETNPSYMENGRLYDNGTLLGGYTNDANMYFHHNGGTTFSSLEDGIYRN
Template Known Secondary structure 
TT

TT

SS
TTSTTTT
TT
STT
TT

B

S
B


SSSSB
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   110.........120.........130.........140.........150.........160.........170.........180.........
 
   147..150.........160.......
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Query Sequence  . . . . . . LSHADDSIRQFWIDHCKASRR
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Template Sequence  LFDLADLNHQNPVIDRYLKDAVKMWID
Template Known Secondary structure  STTB
TTST
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   190.........200.........210......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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