Job Description P32170 Confidence 100.00% Date Thu Jan 5 11:49:48 GMT 2012 Rank 5 Aligned Residues 344 % Identity 13% Template d1bxca_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 2.30

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		31	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure												.							.																																																														.
Query SS confidence												.							.																																																														.
Query Sequence		D	R	L	P	V	S	M	H	C	W	.	Q	G	D	D	V	S	.	G	F	E	N	P	E	G	S	L	T	G	G	I	Q	A	T	G	N	Y	P	G	K	A	R	N	A	S	E	L	R	A	D	L	E	Q	A	M	R	L	I	P	G	P	K	R	L	N	L	H	A	I	Y	L	E	S	D	T	P	V	S	R	.
Query Conservation												.							.																																																														.
Alig confidence												.							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.									.	.	.	.	.	.	.	.	.				.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Sequence		P	E	H	R	F	T	F	G	L	W	T	V	G	N	V	G	R	D	P	F	G	D	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	R	L	D	P	V	Y	V	G	H	K	L	A	E	L	.	.	.	.	.	G	V	H	G	V	N	L	H	.	.	.	.	.	.	.	.	.	D	E	D	L
Template Known Secondary structure		G	G	G										T					B	T	T	B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																.	.	.	.	.	T		S						.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.															30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.										.	.	.	.
								108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure		.	.	.	.	.	.																								.
Query SS confidence		.	.	.	.	.	.																								.
Query Sequence		.	.	.	.	.	.	D	Q	I	K	P	E	H	F	K	N	W	V	E	W	A	K	A	N	Q	L	G	L	D	.	F	N	P	S	C	F	S	H	P	L	S	A	D	G	F	T	L	S	H	A	D	D	S	I	R	Q	F	W	I	D	H	C	K	A	S	R	R	V	S	A	Y	F	G	E	Q	L	G	T	P	S
Query Conservation		.	.	.	.	.	.																								.
Alig confidence		.	.	.	.	.	.																								.															.																															.	.	.	.	.
Template Conservation																																														.																															.	.	.	.	.
Template Sequence		I	P	R	G	T	P	P	Q	E	R	D	Q	I	V	R	R	F	K	R	A	L	D	E	T	G	L	K	V	P	M	V	T	G	N	L	F	S	D	P	G	F	K	D	G	.	G	F	T	S	R	D	P	W	V	R	A	Y	A	F	R	K	S	L	E	T	M	D	L	G	A	E	L	G	A	E	.	.	.	.	.
Template Known Secondary structure		S		S	S																					T		B									S	S	S	G	G	G	T	T		.	S	T	T		S	S																					T	T			.	.	.	.	.
Template Predicted Secondary structure																																														.																															.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		181	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.			.
Predicted Secondary structure									.															.																	.	.	.																													.							.	.
Query SS confidence									.															.																	.	.	.																													.							.	.
Query Sequence		V	M	N	I	W	I	P	.	D	G	M	K	D	I	T	V	D	R	L	A	P	R	.	Q	R	L	L	A	A	L	D	E	V	I	S	E	K	L	N	.	.	.	P	A	H	H	I	D	A	V	E	S	K	L	F	G	I	G	A	E	S	Y	T	V	G	S	N	E	F	Y	.	M	G	Y	A	T	S	.	.	R
Query Conservation									.															.																	.	.	.																													.							.	.
Alig confidence									.															.																	.	.	.						.	.																						.							.	.
Template Conservation																																																	.	.
Template Sequence		I	Y	V	V	W	P	G	R	E	G	A	E	V	E	A	T	G	K	A	R	K	V	W	D	W	V	R	E	P	L	N	F	M	A	A	Y	A	E	D	Q	G	Y	G	Y	R	F	A	.	.	L	E	P	K	P	N	E	P	R	G	D	I	Y	F	A	T	V	G	S	M	L	A	L	I	H	T	L	E	R	P	E
Template Known Secondary structure								T	T				S		G	G	G		G	G	G	T																				T							.	.					S	S	S	S	S	S			S	S		S									T	T	S	S	S	G	G
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																	.											.	.							.	.
Query SS confidence																																	.											.	.							.	.
Query Sequence		Q	T	A	L	C	L	D	A	G	H	F	H	P	T	E	V	I	S	D	K	I	S	A	A	M	L	Y	V	P	Q	L	.	L	L	H	V	S	R	P	V	R	W	.	.	D	S	D	H	V	V	.	.	L	L	D	D	E	T	Q	A	I	A	S	E	I	V	R	H	D	L	F	D	R	V	H	I	G	L	D	F
Query Conservation																																	.											.	.							.	.
Alig confidence																																	.											.	.							.	.																			.	.
Template Conservation																																																																								.	.
Template Sequence		R	F	G	L	N	P	E	F	A	H	E	T	M	A	G	L	N	F	V	H	A	V	A	Q	A	L	D	A	G	K	L	L	H	I	D	L	N	G	Q	R	M	N	R	F	D	Q	D	L	R	F	G	S	E	N	L	K	A	A	F	L	L	V	D	L	L	E	S	S	G	Y	.	.	Q	G	P	R	H	F	D	A
Template Known Secondary structure		G						B						T	T	T														T		B							B			S	S	S	S				B		T	T	S	S															T	T		.	.		S
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		F	D	A	S	I	N	R	I	A	A	W	V	I	G	T	R	N	M	K	K	A	L	L	R	A	L	L	E	P	T	A	E	L	R	K	L	E	A	A	G	D	Y	T	A	R	L	A	L	L	E	E	Q	K	S	L	P	W	Q	A	V	W	E	M	Y	C	Q	R	H	D	T	P	A	G	S	E	W	.	.	L	E
Query Conservation																																																																														.	.
Alig confidence																												.	.	.	.																															.																.	.
Template Conservation																												.	.	.	.																															.
Template Sequence		H	A	L	R	T	E	D	E	E	G	V	W	A	F	A	R	G	C	M	R	T	Y	L	I	L	K	.	.	.	.	E	R	A	E	A	F	R	E	D	P	E	V	K	E	L	L	A	A	Y	Y	Q	E	D	P	A	A	L	P	L	M	.	D	P	Y	S	H	E	K	A	E	A	L	K	R	A	E	L	P	L	E
Template Known Secondary structure					T	T																						.	.	.	.																				S				T	T	T	G	G	G	S	.	S	S
Template Predicted Secondary structure																												.	.	.	.																															.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		406	.	.	.			410					.	.	.	.	.	.	.
Predicted Secondary structure						.	.		.	.	.	.
Query SS confidence						.	.		.	.	.	.
Query Sequence		S	V	R	A	.	.	Y	.	.	.	.	E	K	E	I	L	S	R
Query Conservation						.	.		.	.	.	.
Alig confidence						.	.		.	.	.	.
Template Conservation
Template Sequence		A	K	R	H	R	G	Y	A	L	E	R	L	D	Q	L	A	V	E
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions