Job Description P32170 Confidence 99.72% Date Thu Jan 5 11:49:48 GMT 2012 Rank 12 Aligned Residues 248 % Identity 15% Template d1a0ea_ SCOP info TIM beta/alpha-barrel Xylose isomerase-like Xylose isomerase Resolution 2.70

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		115	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.
Predicted Secondary structure										.	.	.	.									.																																																										.
Query SS confidence										.	.	.	.									.																																																										.
Query Sequence		F	K	N	W	V	E	W	A	.	.	.	.	K	A	N	Q	L	G	L	D	.	F	N	P	S	C	F	S	H	P	L	S	A	D	G	F	T	L	S	H	A	D	D	S	I	R	Q	F	W	I	D	H	C	K	A	S	R	R	V	S	A	Y	F	G	E	Q	L	G	T	P	S	V	M	N	I	W	I	P	.	D
Query Conservation										.	.	.	.									.																																																										.
Alig confidence										.	.	.	.									.															.																								.	.	.	.											.					.
Template Conservation																																					.																								.	.	.	.											.
Template Sequence		L	D	K	V	V	E	R	I	K	E	R	M	K	D	S	N	V	K	L	L	W	G	T	A	N	L	F	S	H	P	R	Y	M	H	G	.	A	A	T	T	C	S	A	D	V	F	A	Y	A	A	A	Q	V	K	K	A	L	E	I	.	.	.	.	T	K	E	L	G	G	E	G	Y	V	.	F	W	G	G	R	E
Template Known Secondary structure																S	S											S	S	S	G	G	G	T	T		.	S	T	T		S																			.	.	.	.				T	T		S				.				T	T	S
Template Predicted Secondary structure																																					.																								.	.	.	.											.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.
		189	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure															.																		.	.	.	.																												.	.	.
Query SS confidence															.																		.	.	.	.																												.	.	.
Query Sequence		G	M	K	D	I	T	V	D	R	L	A	P	R	.	Q	R	L	L	A	A	L	D	E	V	I	S	E	K	L	N	P	.	.	.	.	A	H	H	I	D	A	V	E	S	K	L	F	G	I	G	A	E	S	Y	T	V	G	S	N	E	F	Y	.	.	.	M	G	Y	A	T	S	R	Q	T	A	L	C	L	D	A
Query Conservation															.																		.	.	.	.																												.	.	.
Alig confidence															.																		.	.	.	.					.	.	.																					.	.	.
Template Conservation																																									.	.	.
Template Sequence		G	Y	E	T	L	L	N	T	D	L	G	F	E	L	E	N	L	A	R	F	L	R	M	A	V	D	Y	A	K	R	I	G	F	T	G	Q	F	L	I	.	.	.	E	P	K	P	K	E	P	T	K	H	Q	Y	D	F	D	V	A	T	A	Y	A	F	L	K	S	H	G	L	D	E	Y	F	K	F	N	I	E	A
Template Known Secondary structure				S		S	T	T																								T	T			S					.	.	.				S		S	S	S	S			S	S		S												T		G	G	G
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																									.							.	.	.																																															.
Query SS confidence																									.							.	.	.																																															.
Query Sequence		G	H	F	H	P	T	E	V	I	S	D	K	I	S	A	A	M	L	Y	V	P	Q	L	.	L	L	H	V	S	R	.	.	.	P	V	R	W	D	S	D	H	V	V	L	L	D	D	E	T	Q	A	I	A	S	E	I	V	R	H	D	L	F	D	R	V	H	I	G	L	D	F	F	D	A	S	I	N	R	I	.
Query Conservation																									.							.	.	.																																															.
Alig confidence																									.							.	.	.																																.	.	.													.
Template Conservation																																																																		.	.	.
Template Sequence		N	H	A	T	L	A	G	H	T	F	Q	H	E	L	R	M	A	R	I	L	G	K	L	G	S	I	D	A	N	Q	G	D	L	L	L	G	W	D	T	D	Q	F	P	T	N	V	Y	D	T	T	L	A	M	Y	E	V	I	K	A	G	G	F	T	K	.	.	.	G	G	L	N	F	D	A	K	V	R	R	A	S
Template Known Secondary structure							T	T													T	T									B			T	T	S	S	S				B																			T	S		S	S	.	.	.											T	T
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.				.	.	.	.	.	.	.	340	.	.	.	.	.
					336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	A	W	V	I	G	T	R	N	M	K	K	A	L	L	R	A	L	L	E	P	T	A	E	L	R	K	L	E	A	A	G	D	Y	T	A	R	L	A
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		Y	K	V	E	D	L	F	I	G	H	I	A	G	M	D	T	F	A	L	G	F	K	V	A	Y	K	L	V	K	D	G	V	L	D	K	F	I	E	E	K	Y	R
Template Known Secondary structure			S																													T										T	G
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions