Job Description P32170 Confidence 89.61% Date Thu Jan 5 11:49:48 GMT 2012 Rank 42 Aligned Residues 215 % Identity 11% Template c3p6lA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_1903)2 from parabacteroides distasonis atcc 8503 at 1.85 a resolution Resolution 1.85 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																		.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure															.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	K	N	W	V	E	W	A	K	A	N	Q	L	.	G	L	D	F	N	P	S	C	F	S	H	P	L	S	A	D	G	F	T	L	S	H	A	D	D	S	I	R	Q	F	W	I	D	H	C	K	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	V	S	A	Y	F	G	E	Q	L
Query Conservation															.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	E	A	L	D	K	T	Q	E	L	G	L	K	Y	I	E	I	Y	P	G	H	K	L	G	G	K	W	G	D	K	V	F	D	F	N	L	D	A	Q	T	Q	K	E	I	K	E	L	A	A	S	K	G	I	K	I	V	G	T	G	V	Y	V	A	E	K	S	S	D	W	E	K	X	F	K	F	A	K	A	X
Template Known Secondary structure												T	T								T	T					G	G	G	T	T				S	T	T																T	T												S	S	T	T												T
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	P	S	V	M	N	I	W	I	P	D	G	M	K	D	I	T	V	D	R	L	A	P	R	Q	R	L	L	A	A	L	D	E	V	I	S	E	K	L	N	P	A	H	H	I	D	A	V	E	S	K	L	F	G	I	G	A	E	S	Y	T	V	G	S	N	E	F	Y	M	G	Y	A	T	S	R	Q	T	A	L
Query Conservation
Alig confidence								.			.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.			.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	E	F	I	T	.	C	E	.	.	.	.	.	.	.	P	A	L	S	D	W	D	L	V	E	K	L	S	K	Q	Y	N	I	K	I	S	V	H	N	H	P	Q	P	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	W	K	P	E	N	L	L	K	A	I	S	G	R	S	Q	S	L	G	S
Template Known Secondary structure		T		S				.			.	.	.	.	.	.	.			G	G	G												T									S	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S									T	T	S		T	T
Template Predicted Secondary structure								.			.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.		.	.								.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.															.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																													.							.	.	.																											.	.
Query SS confidence																													.							.	.	.																											.	.
Query Sequence		C	L	D	A	G	H	F	H	P	T	E	V	I	S	D	K	I	S	A	A	M	L	Y	V	P	Q	L	.	L	L	H	V	S	R	.	.	.	P	V	R	W	D	S	D	H	V	V	L	L	D	D	E	T	Q	A	I	A	S	E	I	V	R	H	.	.	D	L	F	D	R	V	H	I	G	L	D	F	F	D	A
Query Conservation																													.							.	.	.																											.	.
Alig confidence																								.	.				.							.	.	.																											.	.
Template Conservation																								.	.
Template Sequence		C	S	D	V	G	H	W	R	R	E	G	L	N	Q	I	D	C	L	K	Q	L	K	.	.	G	R	I	I	S	L	H	F	K	D	I	A	P	K	K	A	G	E	N	E	Q	H	D	V	I	W	G	T	G	I	L	D	V	K	G	X	L	K	E	L	K	S	Q	N	F	K	G	V	F	S	I	E	Y	E	Y	N
Template Known Secondary structure											T	T										T	T	.	.	T															T	T		S							T	T	S	S	S	S												T	T											S	S
Template Predicted Secondary structure																								.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	N	R	I	A	A	W	V	I	G	T	R	N	M	K	K	A	L	L	R	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	E	N	S	V	P	D	I	K	E	C	I	Q	Y	F	N	K	T	A	N	E	I	L
Template Known Secondary structure		T	T	S
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions