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Job DescriptionP32170
Confidence100.00%DateThu Jan 5 11:49:48 GMT 2012
Rank2Aligned Residues401
% Identity59%Templatec3p14C_
PDB info PDB header:isomeraseChain: C: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase with a novel high thermo-2 stability from bacillus halodurans
Resolution2.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  LEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQAMR
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Template Sequence  MKSQFERAKIEYGQWGIDVEEALERLKQVPISIHCWQGDDVGGFEL. . . . . . . . . . . . . DYPGKATTPEELRMDLEKALS
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TTTT

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   3......10.........20.........30.........40........ .50.........60.........
 
   85....90.........100 .........110.........120.........130.........140.........150.........160...
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Query Sequence  LIPGPKRLNLHAIYLE. SDTPVSRDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWIDHCK
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Template Sequence  LIPGKHRVNLHAIYAETDGKVVERDQLEPRHFEKWVRWAKRHGLGLDFNPTLFSHEKAKDGLTLAHPDQAIRQFWIDHCI
Template Known Secondary structure  TS
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GGG


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SSSGGGTTS
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  ASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVGSNE
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Template Sequence  ASRKIGEYFGKELETPCLTNIWIPDGYKDTPSDRLTPRKRLKESLDQIFAAEINEAYNLDAVESKLFGIGSESYVVGSHE
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  FYMGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVHI
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Template Sequence  FYLSYALKNDKLCLLDTGHYHPTETVSNKISAMLLFHDKLALHVSRPVRWDSDHVVTFDDELREIALEIVRNDALDRVLI
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   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  GLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAELRKLEAAGDYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSEW
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Template Sequence  GLDFFDASINRIAAWTIGTRNVIKALLFAMLIPHKQLKEWQETGDYTRRLAVLEEFKTYPLGAIWNEYCERMNVPIKEEW
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TTS
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   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   404.....410........
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Query Sequence  LESVRAYEKEILSRR
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Template Sequence  LKEIAIYEKEVLLQR
Template Known Secondary structure  TGGG
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   403......410.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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