Job Description P32170 Confidence 97.68% Date Thu Jan 5 11:49:48 GMT 2012 Rank 29 Aligned Residues 244 % Identity 12% Template c3obeB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_3400)2 from parabacteroides distasonis atcc 8503 at 1.70 a resolution Resolution 1.70 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		A	R	N	A	S	E	L	R	A	D	L	E	Q	A	M	R	L	I	P	G	P	K	R	L	N	L	H	A	I	Y	L	E	S	D	T	P	V	S	R	D	Q	I	K	P	E	H	F	K	N	W	V	E	W	A	K	A	N	Q	L	G	L	D	.	F	N	P	S	C	F	S	H	P	L	S	A	D	G	F	T	L
Query Conservation																																																																.
Alig confidence																.	.	.	.	.																																												.					.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	D	X	P	N	G	L	N	R	L	A	K	A	.	.	.	.	.	G	Y	T	D	L	E	I	F	G	Y	R	E	D	T	G	K	F	G	D	Y	N	N	T	T	F	I	A	S	K	D	Y	K	K	X	V	D	D	A	G	L	R	I	S	S	S	H	L	T	.	.	.	.	.	.	.	.	.	.	P	S	L
Template Known Secondary structure			T	S											T	.	.	.	.	.	T									B		T	T	T	S		B									B												T	T							B			.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.											.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	A	D	D	S	I	R	Q	F	W	I	D	H	C	K	A	S	R	R	V	S	A	Y	F	G	E	Q	L	G	T	P	S	V	M	N	I	W	I	P	D	G	M	K	D	I	T	V	D	R	L	A	P	R	Q	R	L	L	A	A	L	D	E	V	I	S	E	K	L	N	P	A	H	H	I	D	A	V	E	S
Query Conservation
Alig confidence																														.	.	.	.	.	.																													.	.												.	.	.
Template Conservation																														.	.	.	.	.	.																													.	.												.	.	.
Template Sequence		R	E	Y	T	K	E	N	X	P	K	F	D	E	F	W	K	K	A	T	D	I	H	A	E	L	G	V	S	.	.	.	.	.	.	C	X	V	Q	P	S	L	P	R	I	E	N	E	D	D	A	K	V	V	S	E	I	F	N	R	A	G	E	.	.	I	T	K	K	A	G	I	L	W	G	Y	.	.	.	H	N
Template Known Secondary structure						G	G	G																			T		S	.	.	.	.	.	.											S	S																	.	.				T	T	T						.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.																													.	.												.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.							.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.				.	.
		228	.	230																	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.
Query Sequence		K	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	G	A	E	S	Y	T	V	G	S	N	E	F	Y	M	G	Y	A	T	S	R	Q	T	A	L	C	L	D	A	G	H	F	H	P	T	E	V	I	S	D	K	I	S	A	A	M	L	Y	V	P	Q	L	.	L	L	H	V	S	R	P
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.	.					.
Template Conservation																																																																				.	.
Template Sequence		H	S	N	E	F	K	R	V	L	K	A	G	E	K	P	E	Q	N	P	N	P	W	A	P	P	K	G	T	Y	I	E	E	L	F	L	K	N	T	D	P	D	K	V	X	F	E	L	D	V	Y	W	A	V	X	G	Q	Q	D	P	V	E	W	X	E	N	Y	.	.	P	N	R	F	K	L	L	H	I	K	D	R
Template Known Secondary structure			S	G	G	G	S					T	T					S	S			S	S	S				S											S		T	T	T													T	T										S	.	.	T	T	T									S
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.
		291	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		V	R	W	D	S	D	H	V	V	.	.	.	L	L	D	D	E	T	Q	A	I	A	S	E	I	V	R	H	D	L	F	D	R	V	H	I	G	L	D	F	F	D	A	S	I	N	R	I	A	A	W	V	I	G	T	R	N	M	K	K	A
Query Conservation											.	.	.
Alig confidence		.	.	.	.	.					.	.	.						.	.																.
Template Conservation		.	.	.	.	.													.	.																.
Template Sequence		.	.	.	.	.	W	I	I	G	D	S	G	X	X	N	F	P	.	.	N	I	F	K	K	A	Y	E	I	G	I	L	G	Y	Y	.	V	E	L	E	G	D	K	K	G	R	T	Q	F	E	G	V	E	K	S	A	A	Y	L	Q	A	A
Template Known Secondary structure		.	.	.	.	.	S	S	T	T		S	S	S					.	.										T						.							T	T
Template Predicted Secondary structure		.	.	.	.	.													.	.																.
Template SS confidence
							274	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions