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Job DescriptionP32170
Confidence20.77%DateThu Jan 5 11:49:48 GMT 2012
Rank100Aligned Residues153
% Identity15%Templatec3eypB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:putative alpha-l-fucosidase; PDBTitle: crystal structure of putative alpha-l-fucosidase from bacteroides2 thetaiotaomicron
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120.........130.........140.........150.........160.........170.........180......
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Query Sequence  RDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWIDHCKASRRVSAYFGEQLGTPSVMNIWI
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Template Sequence  GDVV. . . . . REFVDACEEYGLKAGI. . . YLGPHDRHEHLSPLYTTERYKEYYAHQL. . . GELMSDYGK. . . . . . IWETWW
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   125... .130.........140.... .....150.........160.........170.. .......180. ......
 
   187..190.........200.........210.........220.........230....
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Query Sequence  PDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . DGAGADELTT. . . . PVYRHWYKIVREKQPDCVIFGTKNSYPFADVRWMGNEAGEAGDPCWATTDSVAIRDEAQYYKGLN
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SBB

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   188.190....... ..200.........210.........220.........230.........240.........250.........260..
 
   235....240..... ....250.........260.........270.........280..
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Query Sequence  . . . . . . . . . . . . ESYTVGSNEFY. . . . . . . . . . . . . . . . . . MGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQ
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Template Sequence  EGMLDGDAYIPAETDVSIRPSWFYHAEEDSRVKSVRELWDIYCTSVGRNSVLLLNFPP. DRRGLIHSTDSLHAALLKQ
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BSSSSSS

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   263......270.........280.........290.........300.........310.........320 .........330.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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