Job Description P32170 Confidence 37.64% Date Thu Jan 5 11:49:48 GMT 2012 Rank 56 Aligned Residues 130 % Identity 18% Template c3emzA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endo-1,4-beta-xylanase; PDBTitle: crystal structure of xylanase xynb from paenibacillus2 barcinonensis complexed with a conduramine derivative Resolution 2.08 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.								.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.									130
Predicted Secondary structure																					.																												.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence																					.																												.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		G	K	A	R	N	A	S	E	L	R	A	D	L	E	Q	A	M	R	L	.	I	P	G	P	K	R	L	N	L	H	A	I	Y	L	E	S	D	T	P	V	S	R	D	Q	I	K	P	.	.	.	.	.	.	.	E	H	F	K	N	W	V	E	W	A	K	A	N	Q	L	G	L	.	.	.	.	.	.	.	.	D
Query Conservation																					.																												.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence																					.											.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	A	V	H	T	R	M	L	Q	T	E	G	E	F	I	A	K	H	Y	N	S	V	T	A	E	N	Q	M	K	.	.	.	.	.	.	.	.	.	.	.	F	E	E	V	H	P	R	E	H	E	Y	T	F	E	A	A	D	E	I	V	D	F	A	V	A	R	G	I	G	V	R	G	H	T	L	V	W	H	N
Template Known Secondary structure																						S					S	S	T	T	S	.	.	.	.	.	.	.	.	.	.	.						S	B	T	T	B															T	T	T								S	B		S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.												.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	P	S	C	F	S	H	P	L	S	A	D	G	F	T	L	S	H	A	D	D	S	I	R	Q	F	W	I	D	H	C	K	A	S	R	R	V	S	A	Y	F	G	E	Q	L	G	T	P	S	V	M	N	I	W	I	P	D	G	M	K	D	I	T	V	D	R	L	A	P	R	Q	R	L	L	A	A	L	D	E
Query Conservation
Alig confidence																		.	.	.	.																			.	.	.
Template Conservation																		.	.	.	.																			.	.	.
Template Sequence		Q	T	P	A	W	M	F	E	D	A	S	G	G	T	A	S	.	.	.	.	R	E	M	M	L	S	R	L	K	Q	H	I	D	T	V	V	G	R	.	.	.	Y	K	D	Q	I	Y	A	W	D	V	V	N	E	A	I	E	D	K	T	D	L	I	M	R	D	T	K	W	L	R	L	L	G	E	D	Y	L	V	Q
Template Known Secondary structure		S			G	G	G	G	B		T	T	S	S	B			.	.	.	.																			.	.	.	T	T	T	T		S									B		S	S	T	T			B									T		T	T
Template Predicted Secondary structure																		.	.	.	.																			.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		211	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	N	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions