Job Description P32170 Confidence 96.54% Date Thu Jan 5 11:49:48 GMT 2012 Rank 37 Aligned Residues 213 % Identity 12% Template c3cnyA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:inositol catabolism protein iole; PDBTitle: crystal structure of a putative inositol catabolism protein iole2 (iole, lp_3607) from lactobacillus plantarum wcfs1 at 1.85 a3 resolution Resolution 1.85 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		K	P	E	H	F	K	N	W	V	E	W	A	K	A	N	Q	L	G	L	D	.	F	N	P	S	C	F	S	H	P	L	S	A	D	G	F	T	L	S	H	A	D	D	S	I	R	Q	F	W	I	D	H	C	K	A	S	R	R	V	S	A	Y	F	G	E	Q	L	G	T	P	S	V	M	N	I	W	I	P	D	G
Query Conservation																						.
Alig confidence												.	.	.								.								.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.											.
Template Conservation												.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.											.
Template Sequence		G	P	E	K	L	N	Y	E	L	K	.	.	.	L	R	N	L	E	I	A	G	Q	W	F	S	S	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	D	G	I	E	K	A	S	E	A	F	E	K	H	C	Q	Y	.	.	.	.	L	K	A	I	N	A	P	V	A	V	.	V	S	E	Q	T	Y
Template Known Secondary structure												.	.	.		T	T													.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.				T	T						.					T	T
Template Predicted Secondary structure												.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.											.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.														80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.
		190	.	.	.											.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	D	I	.	.	.	.	.	.	.	.	.	.	T	V	D	R	L	A	P	R	Q	R	L	L	A	A	L	D	E	V	I	S	E	K	L	N	P	A	H	H	I	D	A	V	E	S	K	L	F	G	I	G	A	E	S	Y	T	V	G	S	N	E	F	Y	M	G	Y	A	T	S	R	Q	T	A	L	C	L	D
Query Conservation						.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.																														.				.	.	.
Template Conservation																																													.				.	.	.
Template Sequence		T	I	Q	R	S	D	T	A	N	I	F	K	D	K	P	Y	F	T	D	K	E	W	D	E	V	C	K	G	L	N	H	Y	G	E	I	A	A	K	Y	G	L	K	V	.	A	Y	H	.	.	.	H	H	X	G	T	G	I	Q	T	K	E	E	T	D	R	L	X	A	N	T	D	P	K	L	V	G	L	L	Y	D
Template Known Secondary structure				T	T		S	S			T	T	T																											T	T				.				.	.	.			T	T	S	S	S		S										T	S		T	T	T
Template Predicted Secondary structure																																													.				.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.																		.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.																	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.																	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	H	F	H	P	T	E	V	I	S	D	K	I	S	A	A	M	L	Y	V	P	Q	L	.	L	L	H	V	S	R	P	V	R	W	D	S	D	H	V	V	.	.	L	L	D	D	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	I	A	S	E	I	V	R	H	D	L	F	D
Query Conservation																										.																	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.				.																	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.
Template Sequence		T	G	H	I	A	V	S	D	G	D	Y	X	A	L	L	N	A	H	I	.	.	D	R	V	V	H	V	H	F	K	D	V	R	R	S	K	E	E	E	C	R	A	K	G	L	T	F	Q	G	S	F	L	N	G	X	F	T	V	P	G	D	G	D	L	D	F	K	P	V	Y	D	K	L	I	A	N	N	Y	K	G
Template Known Secondary structure										S		S								G	.	.	G	G																					T									T	T					T	T	T	S	S													T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	H	I	G	L	D	F	F	D	A	S	I	N	R	I	A	A	W	V	I	G	T	R	N	M	K	K	A	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	I	V	V	E	A	E	Q	D	P	S	K	A	N	P	L	E	X	A	Q	I	A	H	R	Y	I	K	Q	H	L	I
Template Known Secondary structure											T	T	T	S																	T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions