Job Description P32170 Confidence 96.38% Date Thu Jan 5 11:49:48 GMT 2012 Rank 38 Aligned Residues 259 % Identity 16% Template c3bdkB_ PDB info PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		E	Q	A	M	R	L	I	P	G	P	K	R	L	.	.	N	L	H	A	I	Y	L	E	S	D	T	P	V	S	R	D	Q	I	K	P	E	H	F	K	N	W	V	E	W	A	K	A	N	Q	L	G	L	D	F	N	P	S	C	F	S	H	P	L	S	A	D	G	F	T	L	S	H	A	D	D	S	I	R	Q	F
Query Conservation															.	.
Alig confidence															.	.				.	.	.	.	.	.						.																																						.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.						.																																						.	.	.	.	.	.	.
Template Sequence		L	E	E	I	K	A	I	P	G	M	Q	G	I	V	T	A	V	Y	.	.	.	.	.	.	D	V	P	V	G	.	Q	A	W	P	L	E	N	I	L	E	L	K	K	M	V	E	E	A	G	L	E	I	T	V	I	E	S	I	P	V	H	E	D	I	K	Q	G	.	.	.	.	.	.	.	K	P	N	R	D	A
Template Known Secondary structure							T	S	T	T										.	.	.	.	.	.	S	S		T	T	.	S																	T	T																		T	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																				.	.	.	.	.	.						.																																						.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.								.	.	.	.	100	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																							.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.										.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query Sequence		W	I	D	H	C	K	A	S	R	R	V	S	A	Y	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	L	G	T	P	S	V	M	N	I	W	I	P	D	G	M	K	D	I	.	.	.	.	.	.	.	.	.	T	V	D	R	L	A	P	R	Q	R	L	L	A
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	E	N	Y	K	T	S	I	R	N	V	G	A	A	G	I	P	V	V	C	Y	N	F	M	P	V	F	D	W	T	R	S	D	L	H	H	P	L	P	D	G	S	T	S	L	A	F	L	K	S	D	L	A	G	V	D	P	V	A	I	I	E	N	Y	R	Q	N	I	S	E	E	D	L	W	A	N	L	E	Y
Template Known Secondary structure																	T										S	S		S				S	B	S	S				T	T	S		B						S	S	S	S		S	S												T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		207	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.						.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																		.	.	.	.	.																																				.
Query SS confidence							.	.																		.	.	.	.	.																																				.
Query Sequence		A	L	D	E	V	.	.	I	S	E	K	L	N	P	A	H	H	I	D	A	V	E	S	K	.	.	.	.	.	L	F	G	I	G	A	E	S	Y	T	V	G	S	N	E	F	Y	M	G	Y	A	T	S	R	Q	T	A	L	C	L	D	A	G	H	F	.	H	P	T	E	V	I	S	D	K	I	S	A	A	M	L
Query Conservation							.	.																		.	.	.	.	.																																				.
Alig confidence							.	.												.	.	.				.	.	.	.	.																																				.
Template Conservation																				.	.	.
Template Sequence		F	I	K	A	I	L	P	T	A	E	E	A	G	V	K	M	A	I	.	.	.	H	P	D	D	P	P	Y	G	I	F	G	L	P	R	I	I	T	G	Q	E	A	V	E	R	F	L	N	L	Y	D	S	E	H	N	G	I	T	M	C	V	G	S	Y	A	S	D	P	K	N	D	V	L	A	M	T	E	Y	A	L
Template Known Secondary structure														T						.	.	.				S	S	S	S			T	T							S									T	T	S		S	T	T											T	T	S	T	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		279	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300							.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure							.																		.	.	.	.	.	.																			.	.	.	.	.
Query SS confidence							.																		.	.	.	.	.	.																			.	.	.	.	.
Query Sequence		Y	V	P	Q	L	.	L	L	H	V	S	R	P	V	R	W	D	S	D	H	V	V	L	.	.	.	.	.	.	L	D	D	E	T	Q	A	I	A	S	E	I	V	R	H	D	L	F	.	.	.	.	.	D	R	V	H	I	G	L	D	F	F	D	A	S	I	N	R	I	A	A	W	V	I	G	T	R	N	M	K
Query Conservation							.																		.	.	.	.	.	.																			.	.	.	.	.
Alig confidence							.																		.	.	.	.	.	.																			.	.	.	.	.											.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		K	R	N	R	I	N	F	M	H	T	R	N	V	T	A	G	A	W	G	F	Q	E	T	A	H	L	S	Q	A	G	D	I	D	M	N	A	V	V	K	L	L	V	D	Y	D	W	Q	G	S	L	R	P	D	H	G	R	R	I	W	G	D	Q	.	.	.	.	T	K	T	P	G	Y	G	L	Y	D	R	A	L	G
Template Known Secondary structure				T														T	T							S	S	G	G	G	S	S													T	T												B		T	T			.	.	.	.			S	T	T
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.					340	.	.	.	.	.	.	.	.	.	350	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	L	R	A	L	L	E	P	T	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	Y	F	N	G	L	Y	E	A	N	M	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions