Job Description P32170 Confidence 97.31% Date Thu Jan 5 11:49:48 GMT 2012 Rank 31 Aligned Residues 212 % Identity 13% Template c3aamA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endonuclease iv; PDBTitle: crystal structure of endonuclease iv from thermus thermophilus hb8 Resolution 1.58 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		I	K	P	E	H	F	K	N	W	V	E	W	A	K	A	N	Q	L	G	L	D	.	F	N	P	S	C	F	S	H	P	L	S	A	D	G	F	T	L	S	H	A	D	D	S	I	R	Q	F	W	I	D	H	C	K	A	S	R	R	V	S	A	Y	F	G	E	Q	L	G	T	P	S	V	M	N	I	W	I	P	D
Query Conservation																							.
Alig confidence																							.										.	.	.	.	.	.	.	.	.																					.	.	.	.											.					.
Template Conservation																																	.	.	.	.	.	.	.	.	.																					.	.	.	.											.					.
Template Sequence		L	S	P	A	E	V	E	A	F	R	A	L	R	E	A	S	G	G	L	P	A	V	I	H	A	S	Y	L	V	N	L	.	.	.	.	.	.	.	.	.	G	A	E	G	E	L	W	E	K	S	V	A	S	L	A	D	D	L	E	K	.	.	.	.	A	A	L	L	G	V	E	Y	V	V	.	V	H	P	G	.
Template Known Secondary structure																	T	T										T	T			T	.	.	.	.	.	.	.	.	.	T		S	S	T																.	.	.	.					T						.					.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.																					.	.	.	.											.					.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.										.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.		.	.	.	110
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	K	D	I	T	V	D	R	L	A	P	R	Q	R	L	L	A	A	L	D	E	V	I	S	E	K	L	N	P	A	H	H	I	D	A	V	E	S	K	L	F	G	I	G	A	E	S	Y	T	V	G	S	N	E	F	Y	M	G	Y	A	T	S	R	Q	T	A	L	C	L	D	A	G	H	F	H	P	T	E	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																																.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	S	G	R	P	E	R	V	K	E	G	A	L	K	A	L	R	L	A	G	V	R	S	R	P	V	L	L	V	E	N	T	.	.	.	A	G	G	G	E	K	V	G	A	R	F	E	E	L	A	W	L	V	A	D	T	P	L	Q	V	C	L	D	T	C	H	A	Y	A	A	G	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	B	S																	T			S	S	S								.	.	.				T	T	B	S			S									T	T	S	S														T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																.	.	.
Template SS confidence
											111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.								280	.	.	.		.	.	.	.	.	.	290	.	.					.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.					.										.	.	.	.
Query SS confidence													.	.	.	.	.	.	.					.										.	.	.	.
Query Sequence		I	S	D	K	I	S	A	A	M	L	Y	.	.	.	.	.	.	.	V	P	Q	L	.	L	L	H	V	S	R	P	V	R	.	.	.	.	W	D	S	D	H	V	V	L	L	D	D	E	T	Q	A	I	A	S	E	I	V	R	H	D	L	F	D	R	V	H	I	G	L	D	F	F	D	A	S	I	N	R	I	A
Query Conservation													.	.	.	.	.	.	.					.										.	.	.	.
Alig confidence													.	.	.	.	.	.	.					.										.	.	.	.
Template Conservation
Template Sequence		D	V	A	E	D	P	L	G	V	L	D	A	L	D	R	A	V	G	L	E	R	V	P	V	V	H	L	N	D	S	V	G	G	L	G	S	R	V	D	H	H	A	H	L	L	Q	G	K	I	G	E	G	L	K	R	V	F	L	D	P	R	L	K	D	R	V	F	I	L	E	T	P	R	G	P	E	E	D	A	W
Template Known Secondary structure			T	T	T													T		G	G	G										S	S		T	T									T	T	S	S	S	S	T	T							T		G	G	G	T	T	S						S			S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	V	I	G	T	R	N	M	K	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	R	V	F	R	A	W	L	E	E	A
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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