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Job DescriptionP32170
Confidence98.14%DateThu Jan 5 11:49:48 GMT 2012
Rank23Aligned Residues222
% Identity13%Templatec2x7vA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable endonuclease 4; PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........140.........150.........160.........170.........180.........
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Query Sequence  IKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWIDHCKASRRVSAYFGEQLGTPSVMNIWIPDG
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Template Sequence  PSDEAATKFKREMKKHGIDWE. . . NAFCHSGYLI. . NLASPKDDIWQKSVELLKKEVEI. . . . CRKLGIRYLNIHPGS. .
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   190.........200.........210.........220.........230.........240.........250 .........260........
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Query Sequence  MKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVGSNEFYMGYAT. SRQTALCLDAGHFHPTEV
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Template Sequence  . . HLGTGEEEGIDRIVRGLNEVLNNTEGVVILL. . . ENVSQKGGNIGYKLEQLKKIRDLVDQRDRVAITYDTCHGFDSGY
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   113......120.........130.........140... ......150.........160.........170.........180.......
 
   269270.........280 ... ......290.. .......300..... ....310.........320.........330...
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Query Sequence  ISDKISAAMLYV. . . . . . . . . PQL. LLHVSRPVR. . . . WDSDHVVLLDDET. QAIASEIVRHDLFDRVHIGLDFFDASIN
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Template Sequence  DITKKEGVEALLNEIESLFGLERLKMIHLNDSKYPLGAAKDRHERIGSGFIGEEGFAVFFSFKEIQEVPWILETPGGNEE
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   188.190.........200.........210.........220.........230.........240.........250.........260.......
 
   334.....340.......
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Query Sequence  RIAAWVIGTRNMKK
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Template Sequence  HAEDIKKVFEIIEK
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   268.270.........280.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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